Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3319 ATGGCAGTACTCGAAAACACGAACACCAAGATCAAAAGCAAGAACAAGAACAAGAACAATATCATAGAGGAGCCACTGATTCCGGGACTACCTAACGAAATTGCAGAGCTATGTCTTCTTCATCTTCCGTACCCATACCAATCACTAGCACGAGCTGTTTCATCTTCATGGAACAGAGCCATAACTAACCCTTCGTTTCAACAATGCAAGAAAACACTCTCTCGCCCTTACCTCTTCCTCTTCTCGTTCCACAAACTAACCAGAAAGTTCTATTGCCACCTCCTCGACCACCGTACGCGTTCTTCTACCGCCGCTGCTAGATGGTTCACGCTTCCGCTGCCGCCGTCGCCGATCACGTGCTATGGTAAACTACTAACCATAGCCGGAACAATGCGTTTTGGAACTCTTATCTTTAGCACCGCGATGAGCCAGTGGTCGTCGGCGTCGGCGTTGGCGTCAGCTGCGGCGGGGACATTCTTTACGGAGGAGGGGGAAAACGGAAAAATCGTGGCGGTTCATGGAGGCGCGAGCCTGGGCGCGAAAATCTACGATGCGGAGAGTGACACGTGGCGGAACGGGGCGAGAGTGGAGGTTGAGAATGAGGTTGCGTCTTTTGAGGCAGTGGAAAACGAAGGGAAGGTGTTCGTTACGGAAGGGTGGAGGTGGCCGTTTACGGTGATCCCGAGGGGTTGGGTGTACGATACGCGAAGTGACACGTGGCAAGGAATGGGGATAGGGATGAGGGAAGGGTGGAGCGGGGTGGCGGTTGCGGTGGCGGGGAGGGTTTTTAGGATCCCGGAGTACGGGGATGGGGATGTGAAGGTTTACGAGGAGAGGAGCGACACGTGGCGGCTGGTGAGAGGGCGGTTTCCGAGGGAGAAGGTGAAAAGGCCGTTGAAGGCGAAGGGATTGGATGGGAAGATGTACGTGGCGGGGTGTGGGTTGAACGTGGCGATTGGGAGCGTGGTTTCATTGTGTGGAGAAGGAGGGAAACGACAACGACAGGAAGAGGGACGAAACGACAGTGTTTGTATAGAGTTGAAGTGGGAGGTTGTGGAAGCACCTGGGGGATTTCGTGAATTGGAGGCGTGTCATTGCCAGGTTCTGTATGCTTAG 1116 0.5403 MAVLENTNTKIKSKNKNKNNIIEEPLIPGLPNEIAELCLLHLPYPYQSLARAVSSSWNRAITNPSFQQCKKTLSRPYLFLFSFHKLTRKFYCHLLDHRTRSSTAAARWFTLPLPPSPITCYGKLLTIAGTMRFGTLIFSTAMSQWSSASALASAAAGTFFTEEGENGKIVAVHGGASLGAKIYDAESDTWRNGARVEVENEVASFEAVENEGKVFVTEGWRWPFTVIPRGWVYDTRSDTWQGMGIGMREGWSGVAVAVAGRVFRIPEYGDGDVKVYEERSDTWRLVRGRFPREKVKRPLKAKGLDGKMYVAGCGLNVAIGSVVSLCGEGGKRQRQEEGRNDSVCIELKWEVVEAPGGFRELEACHCQVLYA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3319 371 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 7 371 - -
Amo18g3319 371 SMART fbox_2 30 70 IPR001810 GO:0005515
Amo18g3319 371 SUPERFAMILY F-box domain 19 95 IPR036047 GO:0005515
Amo18g3319 371 Gene3D - 81 354 IPR015915 GO:0005515
Amo18g3319 371 PANTHER F-BOX PROTEIN AFR 7 371 - -
Amo18g3319 371 Coils Coil 4 24 - -
Amo18g3319 371 SUPERFAMILY Kelch motif 78 314 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3319 Amo-Chr18 134577958 134579748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3319 - - aip:107614322 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3319 18 134577958 134579748 Amo18g3319 18 134577958 134579748 ECH
Amo08g1989 08 32189762 32191263 Amo18g3319 18 134577958 134579748 hybridization