Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1989 ATGGCAGTACTCGAAAACGCGAACACCAAGATCAAAAGCAAGAACAACAACAAGAACAATATCATAGAGGAGCCACTGATTCCGGGGCTACCTAACGAAATTGCAGAGCTATGTCTTCTTCATCTTCCGTACCCATGCCAATCACTAGCACGAGCTGTTTCATCTTCATGGAACAGAGCCATAACTAACCCGTCGTTTCAACAATGCAAGAAAACACTCTCTCGCCCTTACCTCTTCCTCTTCTCGTTCCACAAACTAACCAGAAAGTTCTATTGCCACCTCCTCGACCACCGTACGCGTTCTTCTACCGCCGCTGCTAGATGGTTCACGCTTCCGCTGCCGCCGTCGCCGATCACGTTCTACGGTAAACTCCTCACCATAGCCGGAACAATGCGTTTTGTAACTCTTATCTTTGGCACCGCGATGAGCCAGTGGTCGTCGGCGTTGGCGGGGACATTCTTTGCGGAGGAGGGGGAAAACGGAAAAATCGTGGCGGTTCATGGAGGCGCGAGCCTGGGCGCGAAAATCTACGATGCGGAGAGTGACACGTGGCGGAACGGGGCGATAGTGGAGGTTGAGAATGAGGTTGCGTCTTTTGAGGCAGTGGAAAACGAAGGGAAGGTGTTCGTCACGGAAGGGTGGAGGTGGCCGTTTACGGTGATCCCGAGGGGTTGGGTGTACGATACGCGAAGTGACACGTGGCAAGGAATGGGGATAGGGATGAGGGAAGGGTGGAGCGGGGTGGCGGTTGCGGTGGCGGGAAGGATTTTTAGGATCCCGGAGTACGGGGATGGGGATGTGAAGGTTTACGAGGAGAGGAGTGACACGTGGCGGATGGTGAGAGGGCGGTTTCCGAGGGAGAAGGTGAAAAGGCCGTTGAAGGCGAAGGGATTGGATGGGAAGATGTACGTGGCGGGGTGTGGGTTGAATGTGGCGATTGGTAGCGTGGTTTCATTATGTGGAGAAGGAGGGAAACGACAACGACAGGAAGAGGGACGAAACGACAGTGTGTGTATAGAGTTGAAGTGGGAGGTCGTGGAAGCGCCTGGGGGATTTCGTGAATTGGAGGCGTGTCATTGCCAGGTGCTGTATGCTTAG 1098 0.5401 MAVLENANTKIKSKNNNKNNIIEEPLIPGLPNEIAELCLLHLPYPCQSLARAVSSSWNRAITNPSFQQCKKTLSRPYLFLFSFHKLTRKFYCHLLDHRTRSSTAAARWFTLPLPPSPITFYGKLLTIAGTMRFVTLIFGTAMSQWSSALAGTFFAEEGENGKIVAVHGGASLGAKIYDAESDTWRNGAIVEVENEVASFEAVENEGKVFVTEGWRWPFTVIPRGWVYDTRSDTWQGMGIGMREGWSGVAVAVAGRIFRIPEYGDGDVKVYEERSDTWRMVRGRFPREKVKRPLKAKGLDGKMYVAGCGLNVAIGSVVSLCGEGGKRQRQEEGRNDSVCIELKWEVVEAPGGFRELEACHCQVLYA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1989 365 SUPERFAMILY Kelch motif 78 308 IPR015915 GO:0005515
Amo08g1989 365 PANTHER F-BOX PROTEIN AFR 7 365 - -
Amo08g1989 365 Coils Coil 4 24 - -
Amo08g1989 365 SUPERFAMILY F-box domain 19 98 IPR036047 GO:0005515
Amo08g1989 365 Gene3D - 89 319 IPR015915 GO:0005515
Amo08g1989 365 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 7 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1989 Amo-Chr8 32189762 32191263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1989 - - aip:107614322 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1989 08 32189762 32191263 Amo18g3319 18 134577958 134579748 hybridization