Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3307 GAGAAAAAAATTAGCCATCAACTCGTCGAGTGCCAACTTGAACACCATAAATATCTATTTTCCCTCATCATCCTGTCACTAACAAAGCAACAACTCATATTTACAGGAAGGCTAAAGGCTGGCTCACTCCCTCACTCACTCAAGCACTCTCGTCTCCATCTTCTAACACTCAAGTCAGATAAAGAAAATATGCAGAGCGGGCGTGGTAACGAGGTTTTCGACGTGATCATCGTCGGCGGCGGTGTAATGGGAAGCGCCACCGCGTATCACGCTGCAAAGAGGGGTCTCCGGACACTCCTCCTCGAGCAATTCGACTTCCTCCACCACCGTGGCTCCTCCCACGGCGAGTCCCGCACAATCCGCGCAACGTACCCACAGCACCATTACTACCCACTCGTCATGGAATCTTACACGCTCTGGCAGCAGGCCCAGGCCCAAATCGGCTACACCGTCTACTTRCCGGCCCACCATCTCGATATCGGCCCGGCTCAAGAKCCAATCCTCCGCGCCGTCATCGACAATTGCCGCCGGCACGCCATGCCGCACGAGYTCRTCAACCGCCGCCAGCTGGCGMCGAAGTTCCCGGGCCGCATCGACATGCCGGACGATTGGATCGGAATATTCAACCGCCTWGGCGGCATCATAAAGCCGACGAAGGCGGTTGCWATGTTCCAATCGCTAGCGCACAAASACGGTGCAGTTTTAAAGGACAAAGCTGAYGTAATCGACGTTAAAAAAGAWGGAGAAAACGGCGTCGTTGTTTTTACATCTAACGGCGAAAGTTATCGKGGAAGGAAGTGTGTTGTAACGGTAGGAGCATGGGTTAACAAGCTTGTGAAGAAAGTGAGTGGAGTTGAATTACCGATTCAGCCACTAGAGACTCATGTGTTTTACTGGAGGGTGAAGGAGGGGCACGAAGGGGATTTCGCAGTAGGGGGRGATTTTCCTACCTTTGCTAGCTGTACAGGGGAAGGAGGGATTTACGTGTACGGAACACCATCATTGGAGTTCCCGGGTTTGGTTAAGGTCGCYGTCCACGGTGGAAATCCGMMTGACCCGGATAAYAGACCTTGGGGTTCAGGGTATAGYGTTCAAGATTTAAAGAAGTGGATTCAACAMACGTTCATGGGCTTGGTCGATTCGAGCGAGCCCGTGGTGAAGCAGGCCTGCATGTATTCTATGACGCCAGATGAAGATTTTATTGTGGATTTCTTGGGTGGGGAGTTTGGGAAGGATGTGGTAGTGGGTGGCGGGTTTTCGGGTCATGGGTTCAAGATGGCCCCGGTTATTGGAAGGGTTTTAACTGAGCTTGCTATAGATGGGGTTGCAAGTGGGGTTGACATCAAACCCTTCAGGATTTCAAGGTTTAGCATGAATTCTAGGATTTGA 1389 0.5104 EKKISHQLVECQLEHHKYLFSLIILSLTKQQLIFTGRLKAGSLPHSLKHSRLHLLTLKSDKENMQSGRGNEVFDVIIVGGGVMGSATAYHAAKRGLRTLLLEQFDFLHHRGSSHGESRTIRATYPQHHYYPLVMESYTLWQQAQAQIGYTVYLPAHHLDIGPAQXPILRAVIDNCRRHAMPHEXXNRRQLAXKFPGRIDMPDDWIGIFNRLGGIIKPTKAVAMFQSLAHKXGAVLKDKADVIDVKKXGENGVVVFTSNGESYRGRKCVVTVGAWVNKLVKKVSGVELPIQPLETHVFYWRVKEGHEGDFAVGGDFPTFASCTGEGGIYVYGTPSLEFPGLVKVAVHGGNPXDPDNRPWGSGYSVQDLKKWIQXTFMGLVDSSEPVVKQACMYSMTPDEDFIVDFLGGEFGKDVVVGGGFSGHGFKMAPVIGRVLTELAIDGVASGVDIKPFRISRFSMNSRI* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3307 462 PANTHER PEROXISOMAL SARCOSINE OXIDASE 68 460 IPR045170 GO:0016491|GO:0050660
Amo18g3307 462 Pfam FAD dependent oxidoreductase 74 437 IPR006076 GO:0016491
Amo18g3307 462 PANTHER PEROXISOMAL SARCOSINE OXIDASE 68 460 - -
Amo18g3307 462 SUPERFAMILY FAD/NAD(P)-binding domain 73 458 IPR036188 -
Amo18g3307 462 SUPERFAMILY FAD-linked reductases, C-terminal domain 290 396 - -
Amo18g3307 462 Gene3D - 156 394 - -
Amo18g3307 462 Gene3D - 73 441 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3307 Amo-Chr18 134345234 134347338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3307 K00306 - gmx:100789864 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1985 08 32105706 32107343 Amo18g3307 18 134345234 134347338 hybridization