Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1985 CAACTCATATTTACAGGAAGGCTAAAGGCTGGCTCACTCCCTCACTCATTCAAGCACTCTCGTCTCCATCTTCTAACACTCAATAAAGAAAATATGCAGAGCGGGCGTGGTAACGAGGTTTTCGACGTGATCATCGTCGGCGGCGGTGTAATGGGAAGCGCCACCGCGTACCACGCTGCAAAGAGGGGTCTCCGGACACTCCTCCTCGAGCAATTCGACTTCCTCCACCACCGTGGCTCCTCCCACGGCGAGTCCCGCACAATCCGCGCAACGTACCCACAGCACCATTACTACCCACTCGTCATGGAATCTTACACGCTCTGGCAGCAGGCCCAGGCCCAAATCGGCTACACCGTCTACTTCCCGGCCCACCATCTCGATATCGGCCCGGCTCAAGACCCAATCCTCCGCGCCGTCATCGACAATTGCCGCCGGCACGCCATGCCGCACGAGATCTTCAACCGCCGCCAGCTGGCGGCGAAGTTCCCGGGCCGCATCGACATGCCGGACGATTGGATCGGAATATTCAACCGCCTGGGCGGCATCATAAAGCCGACGAAGGCGGTTGCGATGTTCCAATCGCTAGCGCACAAAAACGGTGCAGTTTTAAAGGACAAAGCTGAGGTAATCGACGTTAAAAAAGAGGGAGAAAACGGCGTCGTTGTTTTTACATCTAACGGCGAAAGTTATCGCGGAAGGAAGTGTGTTGTAACGGTAGGAGCATGGGTTAACAAGCTTGTGAAGAAAGTGAGTGGAGTTGAATTACCGATTCAGCCACTAGAGACTCATGTGTTTTACTGGAGGGTGAAGGAGGGGCACGAAGGGGATTTCGCAGTAGGGGGTGATTTTCCTACCTTTGCTAGCTGTACAGGGGAAGGAGGGATTTACGTGTACGGAACACCATCATTGGAGTTCCCGGGTTTGGTTAAGGTCGCAGTCCACGGTGGAAATCCGTGTGACCCGGATAAGAGACCTTGGGGTTCAGGGTATAGAGTTCAAGATTTAAAGAAGTGGATTCAACATACGTTCATGGGCTTGGTCGATTCGAGCGAGCCCGTGGTGAAGCAGGCCTGCATGTATTCTATGACGCCAGATGAAGATTTTATTGTGGATTTCTTGGGTGGGGAGTTTGGGAAGGATGTGGTAGTGGGTGGCGGGTTTTCGGGTCATGGGTTCAAGATGGCCCCGGTTATTGGAAGGGTTTTAACTGAGCTTGCTGTTGATGGGGTTGCAAGTGGGGTTGACATCAAACCCTTCAGGATTTCAAGGTTTAGCATGAATTCTAGGATTTGA 1293 0.5282 QLIFTGRLKAGSLPHSFKHSRLHLLTLNKENMQSGRGNEVFDVIIVGGGVMGSATAYHAAKRGLRTLLLEQFDFLHHRGSSHGESRTIRATYPQHHYYPLVMESYTLWQQAQAQIGYTVYFPAHHLDIGPAQDPILRAVIDNCRRHAMPHEIFNRRQLAAKFPGRIDMPDDWIGIFNRLGGIIKPTKAVAMFQSLAHKNGAVLKDKAEVIDVKKEGENGVVVFTSNGESYRGRKCVVTVGAWVNKLVKKVSGVELPIQPLETHVFYWRVKEGHEGDFAVGGDFPTFASCTGEGGIYVYGTPSLEFPGLVKVAVHGGNPCDPDKRPWGSGYRVQDLKKWIQHTFMGLVDSSEPVVKQACMYSMTPDEDFIVDFLGGEFGKDVVVGGGFSGHGFKMAPVIGRVLTELAVDGVASGVDIKPFRISRFSMNSRI* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1985 430 SUPERFAMILY FAD/NAD(P)-binding domain 41 426 IPR036188 -
Amo08g1985 430 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 41 428 IPR006281 GO:0008115
Amo08g1985 430 Gene3D - 41 409 IPR036188 -
Amo08g1985 430 SUPERFAMILY FAD-linked reductases, C-terminal domain 258 364 - -
Amo08g1985 430 PANTHER PEROXISOMAL SARCOSINE OXIDASE 36 428 IPR045170 GO:0016491|GO:0050660
Amo08g1985 430 Pfam FAD dependent oxidoreductase 42 405 IPR006076 GO:0016491
Amo08g1985 430 Gene3D - 124 362 - -
Amo08g1985 430 PANTHER PEROXISOMAL SARCOSINE OXIDASE 36 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1985 Amo-Chr8 32105706 32107343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1985 K00306 - gmx:100789864 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1985 08 32105706 32107343 Amo18g3307 18 134345234 134347338 hybridization