Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3254 AGAGGCTGGAAGGCCCTTCATTCTCCATCATCCAATCCAAGAAGACTCACAAACATTATTAAGAAAGCAAGAGAAATGGAGAACTTGTTTCGTCTAGTAGATCACGAGGAGTTTGTGTCAAAGAGGTGTATATGGGTGAACGGACCAGTGATTGTTGGGGCAGGACCCTCTGGCCTTGCAACTGCAGCATGCCTGAGAGAACAAGGGGTACCCTTCGTTGTTCTCGAAAGACAAGACTGCATAGCGTCGTTATGGCAGAAAAGAACCTATGACAGGTTGAAGCTTCACCTTCCTAAACAGTTCTGCCAGCTTCCTAAACTTCCTTTCCCTGAAGATTTCCCAGAATACCCTTCAAAGAAGCAATTCATCCAATACCTTGAGTCCTACGTAAACCACTTCGACATCAACCCTCACTTCAACCAGTGCGTTCACTCAGCCAGGTACGACGACACCAGCGGTTTCTGGAGGGTTAAGACCGCCGAGGTTGAGTATATCTGCAGGTGGCTCGTCGTTGCTACCGGCGAAAATGCCGAGTGCGTCGTGCCGGAGATCGACGGCCTTTCCAGCTTCCAAGGAGAAGTTATCCACGCTTGTGATTACAAGTCAGGGGAAAGCTTTAGGGGAAAGAATGTTCTTGTTGTCGGATGCGGAAATTCCGGCATGGAACTGTCTCTTGATCTTGTTAACCACCAGGCTTCGCCGTCCATGGTTGTTCGCAGCTCGGTTCATGTACTTCCAAGACAGGTTCTTGGGAAATCGACGTTCGAATTGGCGGTTATGATGCTGAAGTGGCTGCCGCTATGGCTGGTGGACAAGATCATGTTGCTATTGGCATGGCTTGTTCTTGGAAACGTGGAGAAGTACGGTCTCAAGAGGCCTTCAATGGGGCCACTGGAGATGAAGAACACAAAGGGGAAAACCCCTGTTTTGGACATTGGAACCTTGGACAAAATCAGATCCGGTGACATCAAAGTTGTGCCGGGAATCAAAAGGTTCAACGGCGGCGGCCAAGTCGAGCTCGTCGACGGCCAGAAGCTCCACGTGGACGCCGTTGTGCTGGCAACCGGATACAGAAGCAATGTCCCCTCTTGGCTTCAAGAAGGGGAATTGTTCTCGAAGAACGGGTACCCAAAGATGCCGTTTCCACATGGATGGAAAGGGAATGGAGGAGTGTATGCTGTAGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCATCTGATGCTGTGAAAATTGCTCAAGATATTGGAAAAGTGTGGAAAGAAGAGACCAAGCAGAAGCAGCAGCGAACCACCGCTTGCCATAGGCGTTGCATTTCTCAGTTCTAA 1326 0.4977 RGWKALHSPSSNPRRLTNIIKKAREMENLFRLVDHEEFVSKRCIWVNGPVIVGAGPSGLATAACLREQGVPFVVLERQDCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPSKKQFIQYLESYVNHFDINPHFNQCVHSARYDDTSGFWRVKTAEVEYICRWLVVATGENAECVVPEIDGLSSFQGEVIHACDYKSGESFRGKNVLVVGCGNSGMELSLDLVNHQASPSMVVRSSVHVLPRQVLGKSTFELAVMMLKWLPLWLVDKIMLLLAWLVLGNVEKYGLKRPSMGPLEMKNTKGKTPVLDIGTLDKIRSGDIKVVPGIKRFNGGGQVELVDGQKLHVDAVVLATGYRSNVPSWLQEGELFSKNGYPKMPFPHGWKGNGGVYAVGFTKRGLSGASSDAVKIAQDIGKVWKEETKQKQQRTTACHRRCISQF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3254 441 SUPERFAMILY FAD/NAD(P)-binding domain 208 418 IPR036188 -
Amo18g3254 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 49 68 - -
Amo18g3254 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 210 228 - -
Amo18g3254 441 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 34 439 - -
Amo18g3254 441 Gene3D - 49 425 IPR036188 -
Amo18g3254 441 Pfam Flavin-binding monooxygenase-like 51 362 IPR020946 GO:0004499|GO:0050660|GO:0050661
Amo18g3254 441 PRINTS Pyridine nucleotide disulphide reductase class-II signature 48 70 - -
Amo18g3254 441 PRINTS Pyridine nucleotide disulphide reductase class-II signature 206 230 - -
Amo18g3254 441 PRINTS Pyridine nucleotide disulphide reductase class-II signature 167 175 - -
Amo18g3254 441 SUPERFAMILY FAD/NAD(P)-binding domain 50 243 IPR036188 -
Amo18g3254 441 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 34 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3254 Amo-Chr18 133420066 133421763 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3254 K11816 - gmx:100819987 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2456 10 86095716 86098820 Amo18g3254 18 133420066 133421763 hybridization