Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2456 ATGGACTATTGTAGCGAAAGAGAGACAGAAGGAAAGCAAGCGCACGATCCTCTATTCATAGCAATGAAAAATTGTGGTTATAAATCCAGGTCCTTAACACCGAATAAGAATAAAAAGGAATGGATTGAAGGTCCGGTCATCGTGGGAGCCGGACCTTCCGGACTGGCCACGGCAGCCTGCCTCAAAGAAAAAGGCATCCCGTCGGTAATCCTGGAGCGATCCAACTGCATAGCTTCGTTATGGCAGTTAAAAACCTACGACCGCCTTCACCTTCACTTGCCCAAGCAATTCTGCGAGCTTCCATTGATGGGATTCCCTCCAGATTTTCCCACCTATCCAACCAAGCAGCAGTTCGTACAGTACTTGGAGGACTACGCCGACCGGTTCGGGATTAGGCCGCGGTTCAATGAGACCGTGGACCGAGCCGAGTTCGACTCCAGAATTGGGATGTGGAAGTTGATCACTAGTGGCGGTTCAAGTACTGAGTACACGTGCCGGTGGTTGATCGTGGCCACCGGCGAGAATGCGGAGGCGGTGGTGCCGCAGATTGAAGGGATTCAGGAATTTCAAGGGGCTATAAGGCACACGAGTTTGTATAAAAGTGGAGAAGAGTTTAGAGGGAAGAAGGTTTTGGTTGTTGGATGCGGAAATTCCGGCATGGAAGTTTGTTTGGATCTTTGTAACCATGATGCTGCTCCTTCACTTTGTGTTAGAGATTCAGTACACATCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGCTGTCCATGTGGTTACTGAAGTGGTTTCCATTGCGACTTGTCGATCGGTTCCTCCTGATCGTGTCATGGCTCATGCTAGGTGACACTTCGCGGTTCGGTTTGGATCGGCCTCGTTTGGGTCCCCTCGAACTCAAGAACCTCTCCGGAAAGACCCCTGTCCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTGCGTCCAAGCATAAAGCGGCTAAAACGTCACACTGTGGAGTTTGTCGATGGAAGAATAGAGAATTTTGATGCCATCATTTTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTAAAGGAAAATGATATGTTCTCAAAGGAAGATGGTTTCCCAATGAAGCCATTCCCAAATGGGTGGAAAGGAAGGAATGGACTCTATGCTGTGGGTTTCACCAAAAAGGGACTGCTTGGTGCATCCATTGATGCAAAGAGAATAGCTCAAGACATTGAGAGGTGTTACAAACATGAGGCAAATAATCATCATGCTAATAATGCCTTCCCTCAATCAAATTCATAG 1311 0.4775 MDYCSERETEGKQAHDPLFIAMKNCGYKSRSLTPNKNKKEWIEGPVIVGAGPSGLATAACLKEKGIPSVILERSNCIASLWQLKTYDRLHLHLPKQFCELPLMGFPPDFPTYPTKQQFVQYLEDYADRFGIRPRFNETVDRAEFDSRIGMWKLITSGGSSTEYTCRWLIVATGENAEAVVPQIEGIQEFQGAIRHTSLYKSGEEFRGKKVLVVGCGNSGMEVCLDLCNHDAAPSLCVRDSVHILPREMLGKSTFGLSMWLLKWFPLRLVDRFLLIVSWLMLGDTSRFGLDRPRLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPSIKRLKRHTVEFVDGRIENFDAIILATGYKSNVPYWLKENDMFSKEDGFPMKPFPNGWKGRNGLYAVGFTKKGLLGASIDAKRIAQDIERCYKHEANNHHANNAFPQSNS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2456 436 Gene3D - 45 424 IPR036188 -
Amo10g2456 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 45 64 - -
Amo10g2456 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 165 183 - -
Amo10g2456 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 209 227 - -
Amo10g2456 436 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 35 426 - -
Amo10g2456 436 Pfam Flavin-binding monooxygenase-like 47 362 IPR020946 GO:0004499|GO:0050660|GO:0050661
Amo10g2456 436 SUPERFAMILY FAD/NAD(P)-binding domain 46 241 IPR036188 -
Amo10g2456 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 44 66 - -
Amo10g2456 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 166 174 - -
Amo10g2456 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 205 229 - -
Amo10g2456 436 SUPERFAMILY FAD/NAD(P)-binding domain 206 417 IPR036188 -
Amo10g2456 436 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 35 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2456 Amo-Chr10 86095716 86098820 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2456 K11816 - gmx:100799546 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2456 10 86095716 86098820 Amo18g3254 18 133420066 133421763 hybridization