Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1705 ATGGTTGTAGAAGAGAAGCAAAACAAAGCAGTAATTGATAAATCAATATGGGCATGGATGAAGGCTATATCATATGTGGTGATAGGAATTGCTCTTTTATCCATTTTGGCAGATCCCCTTATAAAAAGTGTCAAGAATTTCTCTAACAATGCTGGAGTTCATCCATTCTTTGTGTCATTTATTTTGGTGCCATTGGCCACAAATGCTAGGGAAGCAACTTCAGCCATCAAAGAAGCAAGCCACAAGAAGCCTAGGACTACTTCTCTCGCCATTTCTGAGGTTAATTAA 288 0.3854 MVVEEKQNKAVIDKSIWAWMKAISYVVIGIALLSILADPLIKSVKNFSNNAGVHPFFVSFILVPLATNAREATSAIKEASHKKPRTTSLAISEVN* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1705 95 Pfam Sodium/calcium exchanger protein 25 94 IPR004837 GO:0016021|GO:0055085
Amo18g1705 95 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 20 94 - -
Amo18g1705 95 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 20 94 - -
Amo18g1705 95 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1705 Amo-Chr18 34595129 34595416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1705 38 94 EF-hand Containing Proteins AT1G53210 57.895 7.44e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1705 - - aprc:113855499 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1003 18 16321149 16324017 Amo18g1705 18 34595129 34595416 ECH
Amo18g1705 18 34595129 34595416 Amo18g1705 18 34595129 34595416 ECH