Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1472 ATGGCTTCGGTTCACAGCGCCATCCCAACCCGCAGTTTCCTCTCACCGGTTTCCAAATCGAAATCGAAATCATTGGCCGCACCAAGCTGCAGAGCTTCCCGGCGTCGAGATTCTCCGGGAATCAATTTTCTCGGGAAACAAAGGAGGATTTTGGCGGCGGTGAATTCGTCGGTGGAGGAAGTAGACGTGATATCGGTGCAGAGCGGCGACATTACGGACCAGCAGGAGGGCGGAGCAGCTGCGGCGAGCAGGGCGGAGGTGGAAGGCGGAGGCAGCGACGGCGAGTTGGCGACTCAGGTGAGTGGATTCGGAACGGGGGAGGGTTTGTTATCGTTGGAAGGGTTTTCTTCTGCTTCGACTTCTTCTTCAATTGGGAATGAGACTGAAGAGAGCATGGAGAAGCTTATGGATAGAACCATCAATGCAACTATTGTTCTCGCCGCCGGAACCTTCGCTATCACCAAGCTCCTCACCATTGATCATGATTACTGGCATGGATGGACGCTTTTTGAGATACTACGGTATGCACCTCAGCATAATTGGTCTGCTTATGAGGAAGTTCTTAAGACGAATCCAGTTTTTGCAAAGATGGTGATCAGTGGTGTTGTTTATTCCATTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTATTTTTGAGTTTGACCGAGCTAGGATGTTCAGATCAGGGCTTGTTGGGTTTACTCTGCATGGCTCTCTTTCTCATTACTATTATCAGTTTTGTGAGGAGCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGCCAAAGTTGCATTTGATCAAACAGCGTGGTCTGCAGTTTGGAACAGCATTTATTATACCGTAGTTGCATTATTGCGTCTTGACTCTCCTATCAGCATTTTTAACGAATTGAAGGCAACCTTTTTCCCCATGCTGACTGCTGGGTGGAAGCTGTGGCCATTTGCTCATCTCATCACTTATGGTGTAATTCCAGTTGAGCAAAGACTTCTTTGGGTGGATTGTGTAGAGCTCATTTGGGTGACCATACTTTCAACTTATTCAAATGAAAAATCAGAAGCAAGGAACTCAGAGTCCGAGGTACCTGCAGAAGTGAAATCAATCGAGGACTAA 1116 0.4767 MASVHSAIPTRSFLSPVSKSKSKSLAAPSCRASRRRDSPGINFLGKQRRILAAVNSSVEEVDVISVQSGDITDQQEGGAAAASRAEVEGGGSDGELATQVSGFGTGEGLLSLEGFSSASTSSSIGNETEESMEKLMDRTINATIVLAAGTFAITKLLTIDHDYWHGWTLFEILRYAPQHNWSAYEEVLKTNPVFAKMVISGVVYSIGDWIAQCFEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKEWWVVPAKVAFDQTAWSAVWNSIYYTVVALLRLDSPISIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARNSESEVPAEVKSIED* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1472 371 MobiDBLite consensus disorder prediction 72 98 - -
Amo18g1472 371 Pfam Mpv17 / PMP22 family 293 346 IPR007248 GO:0016021
Amo18g1472 371 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 113 368 IPR007248 GO:0016021
Amo18g1472 371 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 113 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1472 Amo-Chr18 28069985 28073508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1472 184 354 Miscellaneous Gene Families AT2G14860 27.485 9.74e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1472 K13348 - gmx:100805057 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1472 18 28069985 28073508 Amo18g1472 18 28069985 28073508 ECH
Amo18g1472 18 28069985 28073508 Amo08g1533 08 25072416 25075858 hybridization