Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1533 ATGGCTTCGGTTCACAGCGCCATCCCAACCCGCAGTTTCCTCTCACCGGTTTCCAAATCGAAATCGAAATCATTGGCCGSCACCAAGCTGCAGAGCTTCCCGGCGTCGAGATTCTCCGGGAATCKAATTTTCTCGGGAAACYAAAGGAGGATTTTGGCGGCGGTGAATTCGTCGGTGGAGGAAGTAGACGTGATATCGGTGCAGAGCGGCGACATTACGGACCAGCAGGAGGGCGGAGCAGCTGCGGCGAGCAGGGCGGAGGTGGAAGGCGGAGGCAGCGACGGCGAGTTGGCGACTCAGGTGAGTGGATTCGGAACGGGCGAGGGTTTGTTATCGTTGGAAGGGTTTTCCTCTGCTTCGACTTCTTCAATTGGGAATGAGACTGAAGAGAGCATGGAGAAGCTTATGGATAGAACCATCAATGCAACTATTGTCCTAGCCGCCGGAACCTTCGCTATCACCAAGCTCCTCACCATTGATCATGATTACTGGCATGGATGGACACTTTTTGAGATACTACGGTATGCACCTCAGCATAATTGGTCTGCTTATGAGGAAGTTCTTAAGACGAATCCAGTTTTTGCAAAGATGGTGATCAGTGGTGTTGTTTATTCCATTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTATTTTTGAGTTTGACCGAGCTAGGATGTTCAGATCAGGGCTTGTTGGGTTTACTCTGCATGGCTCTCTTTCTCATTACTATTATCAGTTTTGTGAGGAGCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGCCAAAGTTGCATTTGATCAAACAGCGTGGTCTGCAGTTTGGAACAGCATTTATTATACTGTAGTTGCATTATTGCGTCTTGACTCTCCTATCAGCATTTTTAACGAATTGAAGGCAACCTTTTTCCCCATGCTGACTGCTGGGTGGAAGCTGTGGCCATTTGCTCATCTCATCACTTATGGTGTAATTCCAGTTGAGCAAAGACTTCTTTGGGTGGATTGTGTAGAGCTCATTTGGGTGACCATACTTTCAACTTATTCAAATGAAAAATCAGAAGCAAGGAACTCAGAGTCCGAGGTACCTGCAGAAGTGAAATCAATCGAGGACTAA 1116 0.4749 MASVHSAIPTRSFLSPVSKSKSKSLAXTKLQSFPASRFSGNXIFSGNXRRILAAVNSSVEEVDVISVQSGDITDQQEGGAAAASRAEVEGGGSDGELATQVSGFGTGEGLLSLEGFSSASTSSIGNETEESMEKLMDRTINATIVLAAGTFAITKLLTIDHDYWHGWTLFEILRYAPQHNWSAYEEVLKTNPVFAKMVISGVVYSIGDWIAQCFEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKEWWVVPAKVAFDQTAWSAVWNSIYYTVVALLRLDSPISIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARNSESEVPAEVKSIED* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1533 371 Pfam Mpv17 / PMP22 family 293 346 IPR007248 GO:0016021
Amo08g1533 371 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 114 368 - -
Amo08g1533 371 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 114 368 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1533 Amo-Chr8 25072416 25075858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1533 184 354 Miscellaneous Gene Families AT2G14860 27.485 1.17e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1533 K13348 - gmx:100805057 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1472 18 28069985 28073508 Amo08g1533 08 25072416 25075858 hybridization