Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1448 ATGGGTTTTCTTTTCGTGAAAACGGTTGTAATCTCCACCGGAATAGTGTCCATGGCAATGGGGCTGAAGCTCACAGTTCCACTCCTCACCGAAGCCGTACCTTCCATCTCCACCTTCTTCTTCACTTGTCTCACTCCTCCTTACCTCTACCTTCTCCTCAACTTCATCATCCTCTCCATCTTCGCCACCTCTAAGCTCACCCACCACCACAACCACTCTCCGCCGGACTCGCCTCCCGAGACCCTCCTCTACCACGCACCCGAACCACTCAAGATCTCGCAAAATGACTACAGCGGCGTCGTTTCGGAAGAATTCCTCTACGAGCCACCGAAAACCAACGAAACCGTCACCAACGACGAGAACTTACCGTTGAAAACGACGGTTACAGTATCCGAAGAAGCCGTTGGCATGCAGAAGAAGGACTCCTCGGATCTCGATTTGGCGTTCTCCGATGAGAACCAGAAACCGCCGGTATCCGCCAGGTTCAGCCACCGGAAAGCCGCTAAAGCAAGTCCAGAAGGAGGGAAGGTGGTTGCGTTGGGAGTAGCGAAGCCGAAGAGGCAGGACACACTGGAGAGCACATGGAGGACCATAACGGAAGGTCGGCCCATGCCGTTGACCAGGCATCTCAAGAAATCTGACACGTGGGAGCAGGCTCGCCGGAGCGCCGCTCCGTTGACGGATCTCAACGGCGGCGAAGGAGGTAAGACGCCTCCTCCTACGAAGATGAAGAAGGCCGAGACATTCGGCGGGAGGGAGAACAACGTTTCTCCGGCTGGTGGCAGCAGCAGCGCTGGCAGGCTGAGGAAGGAGCCATCACTGAGTCAGGATGAGTTGAATCGGCGAGTTGAAGCGTTCATTCACAAGTTCAATGAAGAGATGAGGCTGCAGAGGCAGGAATCGCTGAGGCAGTACCGTGCGATGGTAAATGGCGGAGTTCACTGA 945 0.5545 MGFLFVKTVVISTGIVSMAMGLKLTVPLLTEAVPSISTFFFTCLTPPYLYLLLNFIILSIFATSKLTHHHNHSPPDSPPETLLYHAPEPLKISQNDYSGVVSEEFLYEPPKTNETVTNDENLPLKTTVTVSEEAVGMQKKDSSDLDLAFSDENQKPPVSARFSHRKAAKASPEGGKVVALGVAKPKRQDTLESTWRTITEGRPMPLTRHLKKSDTWEQARRSAAPLTDLNGGEGGKTPPPTKMKKAETFGGRENNVSPAGGSSSAGRLRKEPSLSQDELNRRVEAFIHKFNEEMRLQRQESLRQYRAMVNGGVH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1448 314 MobiDBLite consensus disorder prediction 210 276 - -
Amo18g1448 314 PANTHER COTTON FIBER (DUF761) 5 312 - -
Amo18g1448 314 Pfam Domain of unknown function (DUF4408) 34 66 IPR025520 -
Amo18g1448 314 Pfam Cotton fibre expressed protein 276 310 IPR008480 -
Amo18g1448 314 PANTHER DUF761 DOMAIN PROTEIN 5 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1448 Amo-Chr18 27376596 27378041 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1448 - - gmx:100818795 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1448 18 27376596 27378041 Amo18g1448 18 27376596 27378041 ECH
Amo18g1448 18 27376596 27378041 Amo08g1523 08 24967539 24969293 hybridization