Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1523 ATGGGTTTTCTTTTCGTGAAAACGGTTGTAATCTCCACCGGAATAGTGTCCATGGCAATGGGGCTGAAGCTCACAGTTCCACTCCTCACCGAAGCCGTACCTTCCATCTCCACCTTCTTCTTCACTTGTCTCACTCCTCCTTACCTCTACCTTCTCCTCAACTTCATCATTCTCTCCATCTTCGCCACCTCTAAGCTCACCCACCACCACAACCACTCTCCGCCAGACTCGCCTCCCGAGACCCTCCTCTACAACGCACCCGAACAACTCAAGATCTCGCAAAATGACTACAGCGGCATCGTTTCGGAAGAATTCCTTTACGAACCACCGAAAACCAACGAAACCGTCACAAACGACGAGAACTTACCGTTGAAAACGACGGTTACCGTATCCGAAGAAGCCGTTGGCATGCAGAAGAAGGACTCCTCGGATCTTGATTTGGCGTTCCCCGATGAGAACCAGAAACCGCCGGTATCCGCCAGGTTCAGCCACCGGAAAGCCGCTAAAGCAAGTCCAGAAGGAGGGAAGGTGGTTGCGTTGGGAGTAGCGAAGCCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACCATAACGGAAGGTCGGCCCATGCCGCTGACCAGGCATCTCAAGAAATCTGACACGTGGGAGCAGGCTCGCCGGAGCGCCACTCCGTTGACGGATCTCAACGGCGGCGAAGGAGGTAAGACGCCTCCTCCTCCGAAGATGAAGAAGGCCGAGACATTCGGCGGGAGGGAGAACAACGTTTCTCCGGCTGGTGGCAGCAGCGGCGCTGGCAGGCTGAGGAAGGAGCCATCACTGAGTCAGGATGAGTTGAATCGGCGAGTTGAAGCGTTCATTCACAAGTTCAATGAAGAGATGAGGCTGCAGAGGCAGGAATCGCTGAGGCAGTACCGTGCGATGGTAAATGGCGGAGTTCACTGA 945 0.5513 MGFLFVKTVVISTGIVSMAMGLKLTVPLLTEAVPSISTFFFTCLTPPYLYLLLNFIILSIFATSKLTHHHNHSPPDSPPETLLYNAPEQLKISQNDYSGIVSEEFLYEPPKTNETVTNDENLPLKTTVTVSEEAVGMQKKDSSDLDLAFPDENQKPPVSARFSHRKAAKASPEGGKVVALGVAKPKRQDTLESTWRTITEGRPMPLTRHLKKSDTWEQARRSATPLTDLNGGEGGKTPPPPKMKKAETFGGRENNVSPAGGSSGAGRLRKEPSLSQDELNRRVEAFIHKFNEEMRLQRQESLRQYRAMVNGGVH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1523 314 MobiDBLite consensus disorder prediction 210 276 - -
Amo08g1523 314 PANTHER COTTON FIBER (DUF761) 5 312 - -
Amo08g1523 314 Pfam Domain of unknown function (DUF4408) 34 66 IPR025520 -
Amo08g1523 314 Pfam Cotton fibre expressed protein 276 310 IPR008480 -
Amo08g1523 314 MobiDBLite consensus disorder prediction 134 173 - -
Amo08g1523 314 PANTHER DUF761 DOMAIN PROTEIN 5 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1523 Amo-Chr8 24967539 24969293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1523 - - gmx:100818795 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1448 18 27376596 27378041 Amo08g1523 08 24967539 24969293 hybridization