Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1251 ATGATGACTTCAAGTCAACATGCTCCTTCTAACTCAAAGCGAAGCTATGCAAATTTTGCTCCTAGCATTTGGCACGATACTTTCTTGAAATATGCTGATTCCGAATCTTTGGAAGTGGATGAAACTATGAAACAAGAAGTTCAAAAGTACCGAGAGACAGTGAAAATATATCTATCTTCTAGTGATAATAACATCTCCCAAAAACTAACTTTAATCGACTCAATTCAACGTTTAAGTATATCTTATTATTTTGAATGTGAAATTAATGAAGCATTAGAACAAATCCATAATAATTTTACTTACAATGGCCTTGCTATAGAAGAAAACGACATTTATTCTATTGCATTACTCTTTCGTTTGTTTCGACAGAAAGGATATCACATCTCATCAGATATTTTCAACAAATTCAAGAATACAAAGGGAGAATTTGATGAAACTATTATTGTTCAAGATGTTAAAGGAATGTGGAGTTTGTATGAAACTGCACAATTAAGAATTCATGGAGAAGAGATACTAGAGGAAGCACACGAGTTCACCTACAATAAACTTAAGTCTATTGTCAATCAATTGAGTCCATCTCTTGCTGAGCAAATCAATCAGAGTTTAGAACAACCTCTGCACAAGTCAATTCCAAAAATGAGGACAAAATCATATATGTCTTTCTACAAAAAAAATTCTTCGCATGACAAAGGCGATCTTCTAAATTTTGCAAAATTAGATTTCAATATGGTACAAAAATTGTATCAAAAAGAAGTTGGTAGTAACACCAAGTGGTGGATAGAATCAGATTTTGCAAGAAAGGTCCCTTATGCAAGAGATAGATTAGTTGAAGTATTCATTTGGCCATTTGCTGTAAACTCTGAGCCTAAATACAGCACTGCAAGACGGATGTCGGCCAAAGCAATCTCAATTATCTCTCTTATTGATGATACTTATGATGTTTATGGCACAATTGAAGAGCTTGAGCTCTTCACAGAGGCAATGCAAAGATGGGACATTAGTTGCATTGCATCTCTTCCAGAGTGCTTCAAAGTGATTTTTAATGCACTTTTAGAGTTTTGGGTTGAAATGGAGTCGTTGACTGCTGAGAGTGGAAAATCAAGCTTCGTCTTGCAACATGTTAAACAGACTTTTTCTAGGTTGGCACATGCCTACCTTGTTGAAGCAAAATGGTGCCATGAGGGCGATATCCCAACATACGATGAGTACAAGGTTAAGGGAGTTGTATCAAGTGGATACTCTGCTATCTTAACAGTGTTTATTGCTCTGGTAAAAGAACTTGCAACCAAAGAGACGCTTGATTGGCTTTCTAATTGTCCAGCCATCTTAAAAGCTGTATGTACTATTGCAAGGATCAAGAATGATTTGGCCTCACATAAGTTTGAGCAACAAAGGAAACATGTTGCTTCTGCAGTGGAATGTTGCATGAAGCAATATGACTTTTCACAAGAGGAAGCCTATGATTTCATCATCAGGGATATCAATAATTGTTGGAAGAAGGTGAATGAAGAGTACCTCAAGTTAATTAAAAATATCCCAAAGCTTCTGATTGATTGCATTGTTAATTTAGCACGTGTAACTGAGTTTTATTATTTAAACTTTGAGGATAAATACACCAATTGTGAGCTTTTGAAAGATCACATTGTGACACTGTTTTTGGACCCCATCGTCGTGTAG 1677 0.356 MMTSSQHAPSNSKRSYANFAPSIWHDTFLKYADSESLEVDETMKQEVQKYRETVKIYLSSSDNNISQKLTLIDSIQRLSISYYFECEINEALEQIHNNFTYNGLAIEENDIYSIALLFRLFRQKGYHISSDIFNKFKNTKGEFDETIIVQDVKGMWSLYETAQLRIHGEEILEEAHEFTYNKLKSIVNQLSPSLAEQINQSLEQPLHKSIPKMRTKSYMSFYKKNSSHDKGDLLNFAKLDFNMVQKLYQKEVGSNTKWWIESDFARKVPYARDRLVEVFIWPFAVNSEPKYSTARRMSAKAISIISLIDDTYDVYGTIEELELFTEAMQRWDISCIASLPECFKVIFNALLEFWVEMESLTAESGKSSFVLQHVKQTFSRLAHAYLVEAKWCHEGDIPTYDEYKVKGVVSSGYSAILTVFIALVKELATKETLDWLSNCPAILKAVCTIARIKNDLASHKFEQQRKHVASAVECCMKQYDFSQEEAYDFIIRDINNCWKKVNEEYLKLIKNIPKLLIDCIVNLARVTEFYYLNFEDKYTNCELLKDHIVTLFLDPIVV* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1251 558 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 21 228 IPR008930 -
Amo18g1251 558 PANTHER OS04G0344100 PROTEIN-RELATED 3 554 - -
Amo18g1251 558 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 3 554 - -
Amo18g1251 558 CDD Terpene_cyclase_plant_C1 14 555 IPR044814 GO:0010333|GO:0016102
Amo18g1251 558 Pfam Terpene synthase family, metal binding domain 234 500 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g1251 558 SFLD Isoprenoid Synthase Type I 233 557 - -
Amo18g1251 558 Gene3D Farnesyl Diphosphate Synthase 21 542 IPR008949 -
Amo18g1251 558 Pfam Terpene synthase, N-terminal domain 23 202 IPR001906 GO:0010333|GO:0016829
Amo18g1251 558 SUPERFAMILY Terpenoid synthases 232 556 IPR008949 -
Amo18g1251 558 Gene3D - 63 228 IPR036965 GO:0010333|GO:0016829
Amo18g1251 558 SFLD Terpene Cyclase Like 1 C Terminal Domain 233 557 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1251 Amo-Chr18 22179763 22187484 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1251 K15803 K14183 gmx:100781367 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1251 18 22179763 22187484 Amo18g1251 18 22179763 22187484 ECH
Amo18g1251 18 22179763 22187484 Amo08g1416 08 23044688 23047785 hybridization