Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1416 ATGACTGTTACAGCTAATTCTGATCAACATGCATCATCTTACATTGCACGACCATGTGCAAATTTTCGTCCCAACATTTGGGGGGATATTTTCCTTCAATATCATAATTCACCATTGGATGTCGTGAATGAAAATATGAGGCAACAACTTGAAACATGTAAAGAGGAAGTGAAGAAGATTTTTCTATCTTCTAGCAATAATATCTCACAAAAATTAAACATCATTGACTCAATGCAACGTTTGGGTATATCTTATCATTTTGAACGTGAAATTGACCAAGCATTAGAACAAATCCAAAAGATTTCCATCAATAATGCACTCGACATAGAAGAAGGTGACCTACACTCTATTGGATTACTCTTTAGATTGCTTAGACAAAAAGGATATCACATTTCATCAGACATATTCAACAAATTCAAGAATAAGGAGGGAAAGTTCAATGAAACCATTGTGGAAGATGTTGAAGGATTATGGAGTTTGTATGAGGCAACACAATTAAGCACTCATGGTGAAGATTCAATAGATGAAGCACATGATTTTGCTTACACTAACCTCAAGTCCATGATCACCAAAAATAAGTTGAGCACATATCTTGCTAAGCAAATTGATCAAAGCTTAACGCTACCAATTCACAAGGGAGTTCCAAGGATAGAGACAAGACGTTACATGTCCTTCTATGAAGAGGATCCTTCTCATGACAGAGTCCTTCTACGTTTTGCAAAATTAGATTTTAATGTTTTACAGAAAATGCATCAAAAAGAACTTGGAAATATCACAAGGTGGTGGAAAGAATCAGATTTTGCAACTAAGGTTCCCTATGCTAGAGAAAGGGTGGTTGAGGCATACCTTTGGCCATTTTCTATGTCTTCAGAGCCTAAATGTAGCACTCACAGAAGGATTGTTGGCAAATTGATTTCATGTATTTGTCTTCTTGATGATACTTATGATGCCTATGGCACTCTTCAAGAACTTGAACTCTTCACACAGGCAATCAAAAGATGGAATGCTAATCCTATCAAATCTCTTCCAACATGTTTCAAAGTGGTATTTACCGCAATTTTAGAAGTGGTGGATGAAATTGAATCAGCAGTAGTAGATGCGAAAAAATCAACCCTAGTGTCGAAACATGTTAAACAAGCGTTTCTGAATTTGGCTGAAGCTTACTTGTTGGAAGCAAAATGGTGCAATGAGGATTATGTTCCAACTTATGATGAATACAAGGTTAATGGAGCTATGTCTTCTTCATTGCAACTTCACATAGTAGCATTTGTTGGTCTTGGTGAATTTGCAACCAAAGAAGTCTTTGATTGGATATTTAGTGATCCAACAACAATTATAAAAGCTGTATCACTTGTTGGCAGACTCAAGGATGATCTGGCTTCACATAAGTTTGAGCGGGAAAGAGATCATCATGTTGCTTCAGCAGTTGAATGTTGCATGAAGCAATATGGAATTTCACAAGAAGAGACATACAAACTCATTCAAAAGGAAATCAAAGATTTTTGGAAGGATATAAATGAAGTGTGCCTCAATCCAAATAATCATATTCCAAAGGCAGTGCTTGAGTGTGTTGTTAATTTGGGACGTATATCTGAGTTCACATATGCAAACTTTCAAGATAGATTCACAAACGGAGAATTTATGAAAGAATGCGTTTCTGAACTACTTTTAGATCCCATCGCTATTTACTAG 1692 0.3605 MTVTANSDQHASSYIARPCANFRPNIWGDIFLQYHNSPLDVVNENMRQQLETCKEEVKKIFLSSSNNISQKLNIIDSMQRLGISYHFEREIDQALEQIQKISINNALDIEEGDLHSIGLLFRLLRQKGYHISSDIFNKFKNKEGKFNETIVEDVEGLWSLYEATQLSTHGEDSIDEAHDFAYTNLKSMITKNKLSTYLAKQIDQSLTLPIHKGVPRIETRRYMSFYEEDPSHDRVLLRFAKLDFNVLQKMHQKELGNITRWWKESDFATKVPYARERVVEAYLWPFSMSSEPKCSTHRRIVGKLISCICLLDDTYDAYGTLQELELFTQAIKRWNANPIKSLPTCFKVVFTAILEVVDEIESAVVDAKKSTLVSKHVKQAFLNLAEAYLLEAKWCNEDYVPTYDEYKVNGAMSSSLQLHIVAFVGLGEFATKEVFDWIFSDPTTIIKAVSLVGRLKDDLASHKFERERDHHVASAVECCMKQYGISQEETYKLIQKEIKDFWKDINEVCLNPNNHIPKAVLECVVNLGRISEFTYANFQDRFTNGEFMKECVSELLLDPIAIY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1416 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 561 IPR034741 -
Amo08g1416 563 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 3 558 - -
Amo08g1416 563 Gene3D - 66 232 IPR036965 GO:0010333|GO:0016829
Amo08g1416 563 PANTHER OS04G0344100 PROTEIN-RELATED 3 558 - -
Amo08g1416 563 SUPERFAMILY Terpenoid synthases 232 561 IPR008949 -
Amo08g1416 563 CDD Terpene_cyclase_plant_C1 17 559 IPR044814 GO:0010333|GO:0016102
Amo08g1416 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 232 IPR008930 -
Amo08g1416 563 Gene3D Farnesyl Diphosphate Synthase 24 545 IPR008949 -
Amo08g1416 563 Pfam Terpene synthase family, metal binding domain 237 504 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo08g1416 563 Pfam Terpene synthase, N-terminal domain 26 206 IPR001906 GO:0010333|GO:0016829
Amo08g1416 563 SFLD Isoprenoid Synthase Type I 234 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1416 Amo-Chr8 23044688 23047785 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1416 K15803 K14183 gmx:100781367 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1251 18 22179763 22187484 Amo08g1416 08 23044688 23047785 hybridization