Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0959 ATGAAGCATCTTCAAAATATTTCCAAAGAGAAGAATGGCGGGTTTGAGAATGATGACGAGAACTATAATGCTGCAATGCCGATCGAAGGGAAGAAAGGAAAGAAGCAATGGAAGCCGGTTGAAGTGAATCTTAAAGAACACATCAAGGTTCCAATATTTCCAAGATCCAACAACCCAGCCAAACTATATGATGATGATTTTGATGAATATCTAACAAAAATAGCTGGTCAAGAATTTCCACAAGATAAACCACTTTGGGAAGTACATATAATTAAGTATCCAACAAGAAATTCTAAGGGTGTTTTGGTTTTCAAGATGCACCATGCTCTTGGAGATGGATACACCCTAATGGCCTCGTTGCTCTCATGTGTACAAAGAGCAGATGACCCTTCAATTCCCATAACCTTTCCTTCAAGCAAAAAATCAGCGGAATTAGATGATGATGGCAATAGTAATATTAAGATGAAATCCATGCTTAAGAAATTACCTCAAACAATATTTTCGGTGATTAAAGGTGCATCTGACTTTGGGTGGAGTGTGTTGAAAGGTAATTTGCTTGTTGATCATGAATCACCAATTAAGTCAGGGCATGAAGATGTGGGGTCTAGACCTATTGCTATCTCAACTGTCTGTCTCTCTGTGGATAGCATCAAAGAAGTAAAAAATAAGCTCAAAGTGAGCATAAATGATGTCCTAGTGGGCATGATTTTCCTTAGCATTCGGTTATACATGGAAGCAAAGAATGAGGAATCAAGCAAAGCAGATGCAACAGGATTAGTGCTGCTTAATACAAGAAGAATTAGAGCTTACAAGTCAGTGAAGGAGATGCTTGATACTAAAACCAATTCAGGGGCTTCATGGGGAAATCAATTTCAATTCATGCACCTTCCTATTCCCAAAATGAGTGACCATTCCAATTCATTAATAAACCCTCTTGAATTTGTTTTGTCAGCCAACAAAATTATCAATAGCTTGAGAAATTCTCTGGCAATACCACTCAATGGTGTGCTTTTAGGCTTGGTTGATAAAATCAAAGGCCCAGAGGTTGCGGCAAAATATGTGCACAAAACATTGGCAAATTCAAGCCTTAGCATCTCACACATGGTTGGACCAGTTGAAAAAGTGGCTATTGATAATCATCCCGTCAAAGGTTTTTACTTTATGACTGTTGGTTTACGTCAGAGTCTCACGGTGACAATATTAAGTTACATGGGGTATTTACGCATTGGATTTGGAGTGGAAAAAGATTGGATAGATGTACACCATTTGATTTCGTGTTTCGAGACTGCCCAAGAAATGATTCTGAATGCTGCAAATAAAATATAA 1326 0.3801 MKHLQNISKEKNGGFENDDENYNAAMPIEGKKGKKQWKPVEVNLKEHIKVPIFPRSNNPAKLYDDDFDEYLTKIAGQEFPQDKPLWEVHIIKYPTRNSKGVLVFKMHHALGDGYTLMASLLSCVQRADDPSIPITFPSSKKSAELDDDGNSNIKMKSMLKKLPQTIFSVIKGASDFGWSVLKGNLLVDHESPIKSGHEDVGSRPIAISTVCLSVDSIKEVKNKLKVSINDVLVGMIFLSIRLYMEAKNEESSKADATGLVLLNTRRIRAYKSVKEMLDTKTNSGASWGNQFQFMHLPIPKMSDHSNSLINPLEFVLSANKIINSLRNSLAIPLNGVLLGLVDKIKGPEVAAKYVHKTLANSSLSISHMVGPVEKVAIDNHPVKGFYFMTVGLRQSLTVTILSYMGYLRIGFGVEKDWIDVHHLISCFETAQEMILNAANKI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0959 441 MobiDBLite consensus disorder prediction 1 22 - -
Amo18g0959 441 Pfam WS/DGAT C-terminal domain 287 433 IPR009721 GO:0004144
Amo18g0959 441 MobiDBLite consensus disorder prediction 1 17 - -
Amo18g0959 441 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 28 231 IPR004255 GO:0004144|GO:0045017
Amo18g0959 441 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 26 440 IPR045034 GO:0008374|GO:0045017
Amo18g0959 441 PANTHER O-ACYLTRANSFERASE WSD1-LIKE 26 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0959 Amo-Chr18 15520217 15525679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0959 35 440 Acyl Lipid Metabolism Gene Families AT3G49190 26.651 5.78e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0959 - - adu:107462212 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0959 18 15520217 15525679 Amo18g0959 18 15520217 15525679 ECH
Amo18g0959 18 15520217 15525679 Amo03g0563 03 10267168 10273917 PCT
Amo03g0563 03 10267168 10273917 Amo18g0959 18 15520217 15525679 PCT