Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0563 ATGGAAAGCTTCTATGAAGAGGTTGAACAGCCAGTGAGTCCTCCAGGGCAATATTTCAACAGCTCAGTGATATGTTCATATGTTTTTGGATTTCTTGAAATAGCAGTTCCAATTGATGACTCACAGGCCATAACTTTGATTAAAGATGTCTTCCTTCCAATTAATCCACGCTTCTCCTCTATCATGGTTACATCCAAAGATGGCAAAAAGATATGGAAAAGAGTGGAAGTGAAGCCAGAAGAGCATTTGAAGTTTCCAAAATTCCCAGAAAACCCTTCAATTGAATTCTATGACCAATACCTCAGCGACTATGTTTCAATGATTCTAACCGAAAAAACACCGCAAAACAAACCACTATGGGAGATCCACGTCATAAAGTACCCAACAACAAATGGAAAAGGAACCTTAATATTCAAACTGCACCATGCACTTGGTGATGGTTATTCACTCATGGGTGCTCTTCTTTCTTGTCTCCAAAGGGCTGACGACCCTTCTCTTCCGTTGTCTTTCCCGTCGAAGACACCGGCGGGGAAGGCATCGGAGTCATCAGGAAATGAAAAGAAGTGCATGTTGAAGAGGTTGCCTTCAATTGTGTCATCTTTCTTTTATTCTTTATCTGATTCTGGATGGAGCATAATGAAGGCAAGAATACTGAAAGATGATAAGACTCCTATAAGGTCTGGATTTGAAGCATGTGAGTTAAAGCCTTTTACCTTATCAAACATATCATTGTCTCTTGATGATATCAAAGGGATCAAGTCCAAACTTGGTGTGACAATAAATGATGTGGTTACGGGGATGATCTTCTACGGGCTTCGATTGTACATGCAAGAAATGAAGAAGAAAAGCAAAAGAGCAGAGTCAACAGCAGTGGTGATGCTGAACACAAGAAACATTGGAGGGTACCGTTCAGTGAAGGAGATGCTAAACCCTGATTCTAAGGGTATTTGGGGCAACCAAATTTCTTTCTTACAAGTTTCAATACCAAAGCTAAGTGAAGGAAGAATCTCGAATCCTATTGAGTTTGTTAGGGAAGCTCATAAATTAATCAAGAGGAAGAGACGCTCATTCAGTGTTTATGTCATTGGCTTCATCTTGTCTTTTGAGATGAAGTTAAGAGGGCCCGAGGCTGTGGCCAAAAACATTTATAACACTTTGGAGAATTCAAGTGTTGTTGTGTCAAACTTAATGGGGCCAGTTGAGAAGATGGCATTGGCAAATCATCCAGTGAATGGCTTGTACTTCACCATGACAGGTCTCCCTGAGAATGTAAACATTACAATTATGAGTTATGTGAACACATTAAGAATCACCATGAGAACAATGAAGGGGTTCATAGATGAACAAAAATTCAAAAACTGCATGGAGAAAGCCTTTGAAGTCATATTCAAAGCAGCTATGGAGACTTAA 1410 0.3986 MESFYEEVEQPVSPPGQYFNSSVICSYVFGFLEIAVPIDDSQAITLIKDVFLPINPRFSSIMVTSKDGKKIWKRVEVKPEEHLKFPKFPENPSIEFYDQYLSDYVSMILTEKTPQNKPLWEIHVIKYPTTNGKGTLIFKLHHALGDGYSLMGALLSCLQRADDPSLPLSFPSKTPAGKASESSGNEKKCMLKRLPSIVSSFFYSLSDSGWSIMKARILKDDKTPIRSGFEACELKPFTLSNISLSLDDIKGIKSKLGVTINDVVTGMIFYGLRLYMQEMKKKSKRAESTAVVMLNTRNIGGYRSVKEMLNPDSKGIWGNQISFLQVSIPKLSEGRISNPIEFVREAHKLIKRKRRSFSVYVIGFILSFEMKLRGPEAVAKNIYNTLENSSVVVSNLMGPVEKMALANHPVNGLYFTMTGLPENVNITIMSYVNTLRITMRTMKGFIDEQKFKNCMEKAFEVIFKAAMET* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0563 469 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 101 264 IPR004255 GO:0004144|GO:0045017
Amo03g0563 469 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 4 468 IPR045034 GO:0008374|GO:0045017
Amo03g0563 469 Pfam WS/DGAT C-terminal domain 317 462 IPR009721 GO:0004144
Amo03g0563 469 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 4 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0563 Amo-Chr3 10267168 10273917 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0563 6 439 Acyl Lipid Metabolism Gene Families AT3G49190 29.139 2.54e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0563 - - gmx:100804927 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0959 18 15520217 15525679 Amo03g0563 03 10267168 10273917 PCT
Amo03g0563 03 10267168 10273917 Amo18g0959 18 15520217 15525679 PCT