Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0933 ATGGATAACAGTAGTGATGTTCCAGCACGTGTTCAGGGAAAATATCTTGCAATATTTGTCTGCTGGCTTCTTGGCAATGGATGTCTTTTTTCATGGAACAGCATGCTGACAATTGAAGATTACTACGTTTATTTGTTTCCGAAATACCATCCCCCTAGGGTGCTTACTCTTGTGTATCAACCATTTGCAGTTGGAACACTTGCAATACTGGCTTATAATGAGGCCAAAATCAACACAAGAATCCGGAACCTATTTGGATACACTCTCTTTTTCATAAGCACTTTGTTGGTCTTAATTGTAGGTCCTCTTAAATTAACTTGTTTGTGA 327 0.3853 MDNSSDVPARVQGKYLAIFVCWLLGNGCLFSWNSMLTIEDYYVYLFPKYHPPRVLTLVYQPFAVGTLAILAYNEAKINTRIRNLFGYTLFFISTLLVLIVGPLKLTCL* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0933 108 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 100 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo18g0933 108 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 100 IPR030200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0933 Amo-Chr18 14047333 14048094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0933 8 100 Organic Solute Cotransporters AT4G05120 66.667 3.52e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0933 K15014 - gmx:100798899 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0933 18 14047333 14048094 Amo08g1122 08 18755297 18760108 hybridization
Amo18g0933 18 14047333 14048094 Amo03g0667 03 12292536 12295146 PCT
Amo03g0667 03 12292536 12295146 Amo18g0933 18 14047333 14048094 PCT