Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1122 ATGGATAACAGTAGTGATGTTCCAGCACGTGTTCAGGGAAAATATCTTGCAATATTTGTCTGCTGGCTTCTTGGCAATGGATGTCTTTTTTCATGGAACAGCATGCTGACAATTGAAGATTACTACGTTTAYTTGTTTCCGAAATACCATCCTCCTAGGGTGCTTACTCTTGTGTATCAACCATTTGCAGTTGGAACACTTGCAATACTGGCTTATAATGAGGCCAAAATCAACACAAGAATCCGGAACCTATTTGGATACACACTCTTTTTCATAAGCACTTTATTGGTCTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGTCTTGGAACTTACATTGGTATATGCGCAAGTAGCGGCGCTTTTGGGGTTGCGGATGCTCATGTTCAAGGTGGAATGGTGGGAGATTTGTCTTACATGAGACAAGAATTCATTCAGTCTTTCCTTGCTGGTTTGGCAGCATCTGGTGCATTAACCTCTGCTTTGAGGCTAATCACAAAAGCTGCATTTGAGAATTCTAAGGATGGTCTTCGGAAAGGAGCAATTCTATTCTTTGCCATATCAACATTCTTTGAACTTGTTTGTGTTCTTCTCTATGCCTTTGTTTTCCCCAAAATACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGCATAGAAACATTATCTGAAGAAGTTGAGGGATATGAAAAACAACCAGAGAGGAAGGGAAACCAGCAATTGTTACTAGAAAACATGGATTATGCACTTGACATGTTCCTAATATATACTCTCACACTATCCATCTTCCCTGGGTTCCTATCAGAAGATACTGGATCACACAGCCTAGGCACATGGTATGCTCTTGTTTTGATTGCAATGTACAATGTATGTGATCTGATTGGAAGATACATTCCACTAGTGAAGAAGTTGAAGTTGGAGTCCAGGAAGTTGATAACAATAATGATTCTTTGTCGGTTCCTACTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGACCAAGGTTGGATGATATTCTTGACATCCTTCTTGGGCTTGTCCAATGGTTACCTCACTGTATGTGTTCTTACATCTGCACCAAAAGGTTACAAGGGTCCTGAACAAAATGCATTGGGGAACTTGTTGGTGTTGTTTCTCCTTGGAGGCATTTTTGCTGGGGTGACACTTGACTGGCTGTGGTTAATAGGAAAAGACTGGTGA 1248 0.4062 MDNSSDVPARVQGKYLAIFVCWLLGNGCLFSWNSMLTIEDYYVYLFPKYHPPRVLTLVYQPFAVGTLAILAYNEAKINTRIRNLFGYTLFFISTLLVLILDLATSGKGGLGTYIGICASSGAFGVADAHVQGGMVGDLSYMRQEFIQSFLAGLAASGALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELVCVLLYAFVFPKIPIVKYYRSKAASEGSKTVSADLAAGGIETLSEEVEGYEKQPERKGNQQLLLENMDYALDMFLIYTLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVCDLIGRYIPLVKKLKLESRKLITIMILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKDW* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1122 415 PIRSF ENT 4 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 Pfam Nucleoside transporter 124 409 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 123 145 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 151 171 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 271 288 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 327 344 IPR002259 GO:0005337|GO:0016021|GO:1901642
Amo08g1122 415 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 414 IPR030200 -
Amo08g1122 415 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1122 Amo-Chr8 18755297 18760108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1122 8 413 Organic Solute Cotransporters AT4G05120 70.936 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1122 K15014 - gmx:100798899 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0933 18 14047333 14048094 Amo08g1122 08 18755297 18760108 hybridization
Amo08g1122 08 18755297 18760108 Amo03g0667 03 12292536 12295146 PCT
Amo03g0667 03 12292536 12295146 Amo08g1122 08 18755297 18760108 PCT