Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0696 ATGATGGCATCATCATCTCAAGTTATAGCAGATACCAACAATAATAATAATAATGTCACGTTTTGGCAACGGTTTGTTGCTAAGATGGTTGGTGTGATGTTGCAGCTGAAGAAACCGGCAGAAGATGATCCTAGAAGGCTTATTCATTCTTTCAAAGTTGCACTTTCCATCACCACAGTTTCTGCATTTTACTTTGTTAAATCTCTTTTCGTTTGTTTTGATAAAAACCCCATGTGGATAATTATAACCGTCATCCTTGTCTCAGAATTTTCCGTAGGGGCAACACTTGCTAAATGTTTCAATAGAGGTTTAGCAACAGTTTTGGCTAGTGCTCTAGGACTTGGATGTTATTACTTGGTTGATTCAATAATGGGAGGACATATTGTGGGGTCAGTATTTCTTGGAACCCTAATTTTTATCATAGTTGCGACAATGACATATATGCGATTTGTACCTCAAATTAAAGCAAGATATGATTATGGGTTTTTAGTGTTTATCTTGACATTCTGCATAGTATCTCTACCTAGCTACCGAGACGAAGATTTATTAGACATAGCAAAGAGACGAGTAATCACAATTTTCACAGGTGTTTTAGTGTGGATATTGGTTTCCATTATTGTGTACCCCATATGGGCAGGTGAAGATCTTCACAAGTTAGTATCAAAGAATCTTCAAAAACTAGGAGACTCTATTCAAGGTTTTGGAGATGAATGTTTTGGAACATCAGAGGGCGAAGGTTCCAATAAGTCAAACCTTCAAGCATATAAAAGTGTTCTCAATTCAAAGCTTACCGAAGAAAGCTTGACCCCGTCAGAAATAAAAAACAAAGTGCAAGAGACATGCATCCAAATAAGCAAAGAAACAGGAAAATCTCTGAAGGAATTATCAGTGTCAATCCAAAAAACGATTCCACCATGTGCTGCAAACCCTAGCATTGAGAAATCTAAGCTTGTTTCAATGAACCTCAAGTCCATTCTGAAATCAGGGTTATGGGAAGGGACCAATCTGTTTGAGGATATTCCTATTATGACTGTGACTTATTTGCTGCTTGACGTGGTTTCTTGCACCGAGAAAATCGCTGAGTCAGTACATGAATTATCCGTGCAAGCAAAATTCAAGAACAAAGACAGCAAAGTTGCACCAAATTACCCAAATTCTCCTCCTCATGATCTTCAAGAGAAAAATATTGGAGTTCATCATGTTATTACAATCAACTAG 1218 0.3736 MMASSSQVIADTNNNNNNVTFWQRFVAKMVGVMLQLKKPAEDDPRRLIHSFKVALSITTVSAFYFVKSLFVCFDKNPMWIIITVILVSEFSVGATLAKCFNRGLATVLASALGLGCYYLVDSIMGGHIVGSVFLGTLIFIIVATMTYMRFVPQIKARYDYGFLVFILTFCIVSLPSYRDEDLLDIAKRRVITIFTGVLVWILVSIIVYPIWAGEDLHKLVSKNLQKLGDSIQGFGDECFGTSEGEGSNKSNLQAYKSVLNSKLTEESLTPSEIKNKVQETCIQISKETGKSLKELSVSIQKTIPPCAANPSIEKSKLVSMNLKSILKSGLWEGTNLFEDIPIMTVTYLLLDVVSCTEKIAESVHELSVQAKFKNKDSKVAPNYPNSPPHDLQEKNIGVHHVITIN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0696 405 Pfam Aluminium activated malate transporter 40 269 IPR020966 GO:0015743
Amo18g0696 405 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 264 379 - -
Amo18g0696 405 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 21 269 - -
Amo18g0696 405 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 21 269 - -
Amo18g0696 405 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 264 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0696 Amo-Chr18 9554277 9557237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0696 28 370 Miscellaneous Gene Families AT1G08440 36.111 1.56e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0696 - - aprc:113855925 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0696 18 9554277 9557237 Amo18g0696 18 9554277 9557237 ECH
Amo18g0696 18 9554277 9557237 Amo13g1698 13 23823035 23826503 PCT
Amo13g1698 13 23823035 23826503 Amo18g0696 18 9554277 9557237 PCT