Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1698 ATGGCAGGAAATGCAAAAGCTGAGGGAGGAATTGGTGAAGCATGGGAAAAGGTGAAGGGGATGCCAAAATCAATTATGGAGAAGGTGATGAACATTTGTGTGATGACAAAGGAAATAGCACAAGATGATCCTAGAAAAGTGATTCATTCACTCAAAGTTGGTCTTTCAATATCTCTCGTCTCTCTTTTCTATTTCTATCAGCCTCTCTATGAGAATTTTGGACTCTCTGCAATGTGGGCTGTTATGACTGTAGTTGTGGTTTTTGAGTTCACTGTTGGAGCTACTCTTGGAAAAGGTTTGAATAGGACACTAGCCACTTTGACAGCTGGTGCTCTTGGTGTTGGTGCTCATTACTTGGCTAGCCTTGCCGGAGAGACTGCAGAACCCATTTTGATTGGTTTCTTTGTCTTCCTTCAAGCTGCAATAGTATCATTCATAAGGTTCTTCCCAAAAATGAAGGCAAGATATGATTATGGATTGCTGATATTTATTTTGACATTCTCATTGATATCTGTATCCGGGTTCCGTGACGATGAAGTATTGGAAATGGCACATAAGAGGCTTTCAACCATTGTCATTGGAGGCACAGCTTGTGTCATGATCTCCATTTTTGTGTGTCCTGTTTGGGCTGGTGAAGAACTCCATTATTCTATTGCTCTCAACTTGGACAACCTTGCTCATTCCTTACAAGAATTTATAAATAAGCATTTGAAGGCATCAGAGGAAGGAGATTCTAATAAAGATAACAAGTCTTTTATGGAAGGTTACAAAAGCGTTCTCAATTCCAAAAGTAGCGAAGATTCTCTGGCGAATTTTGCAAGATGGGAACCAGGTCATGGGAAGTTCAAATTTCGTCACCCGTGGGACCAATATCTTAAGATTGGGGCTCTTTCTCGTCAATGTGCTTATCGAATTGAAGCTCTCATAAATGGACACCTCAATTCTCCACATATCCAAGGATCATCAACAGCATCATCTGAAATTGTTGGTACGATTGAAGAAGCATGCATAGAAATGAGTGGGGAATCCAGCAAAGCCTTGAAGGAACTTGGATTATCCATAAAGAACATGATGAGCCTTCCATCTTCTAATAACCACATTTCTGAATCAAAAGCTGCAAGCAAGAGGCTCAAGGCATTGCTCCAATCAAGTTTAAAGGAACAAGACACTGATCTTTTATCTCTCATACCGGCTGCCACTGCAGCTTCATTGCTAATTGACATCGTTGATTGCGTCCAGGAAATAGCCGATTCTGTTAACAATCTCGCCGCGCTCGCCGATTTTGAAGAGGGTGATAAATCTCCTAAACCACCATCGTCGCAATCACAGGCCCTACATTGTGAATGTGCTGAACCAGTTCCAAAGATTGATAGCATAGTTTGA 1383 0.4129 MAGNAKAEGGIGEAWEKVKGMPKSIMEKVMNICVMTKEIAQDDPRKVIHSLKVGLSISLVSLFYFYQPLYENFGLSAMWAVMTVVVVFEFTVGATLGKGLNRTLATLTAGALGVGAHYLASLAGETAEPILIGFFVFLQAAIVSFIRFFPKMKARYDYGLLIFILTFSLISVSGFRDDEVLEMAHKRLSTIVIGGTACVMISIFVCPVWAGEELHYSIALNLDNLAHSLQEFINKHLKASEEGDSNKDNKSFMEGYKSVLNSKSSEDSLANFARWEPGHGKFKFRHPWDQYLKIGALSRQCAYRIEALINGHLNSPHIQGSSTASSEIVGTIEEACIEMSGESSKALKELGLSIKNMMSLPSSNNHISESKAASKRLKALLQSSLKEQDTDLLSLIPAATAASLLIDIVDCVQEIADSVNNLAALADFEEGDKSPKPPSSQSQALHCECAEPVPKIDSIV* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1698 460 Pfam Aluminium activated malate transporter 38 423 IPR020966 GO:0015743
Amo13g1698 460 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 7 436 - -
Amo13g1698 460 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 7 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1698 Amo-Chr13 23823035 23826503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1698 26 426 Miscellaneous Gene Families AT1G08440 56.824 6.24e-166 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1698 - - aprc:113859727 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0696 18 9554277 9557237 Amo13g1698 13 23823035 23826503 PCT
Amo13g1698 13 23823035 23826503 Amo18g0696 18 9554277 9557237 PCT