Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0624 ATGGCAGACTTCAAGCACTTTGTGATTGTGAAGTTCAAGGAAGGTGTTGCTGTTGAAGATCTCACCAAAGGGATGGAGAAGTTGGTCTCTGAGATTGATGCTGTTAAGTCCTTTGAATGGGGACAGGACATTGAAAGCTTAGATATGCTGAGACAAGGTTTTACTCATGCATTCTTGATGACATTTGGAAATAAAGAAGACTTTGTTGCATTTCAGAGCCATCCAAATCATGTTGAATTCTCAGCAACATTTTCAGCAGCTATTGAGAAGATTGTGGTGCTGGATTTCTCATCTACTCTTGTCAAGAAGGCACCAGCATGA 321 0.4081 MADFKHFVIVKFKEGVAVEDLTKGMEKLVSEIDAVKSFEWGQDIESLDMLRQGFTHAFLMTFGNKEDFVAFQSHPNHVEFSATFSAAIEKIVVLDFSSTLVKKAPA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0624 106 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Amo18g0624 106 SMART Dabb_2 4 98 IPR013097 -
Amo18g0624 106 Gene3D - 1 106 - -
Amo18g0624 106 PANTHER - 1 105 IPR044662 -
Amo18g0624 106 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Amo18g0624 106 PANTHER EXPRESSED PROTEIN 1 105 - -
Amo18g0624 106 SUPERFAMILY Dimeric alpha+beta barrel 4 97 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0624 Amo-Chr18 8710465 8711375 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0624 - - gmx:100306664 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0624 18 8710465 8711375 Amo13g0182 13 2206381 2207571 PCT
Amo13g0182 13 2206381 2207571 Amo18g0624 18 8710465 8711375 PCT