Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0182 ATGGTGTGGTGTTGCAGAGACATGATGGGGGGATTCAATCACTATGTTGTTGTGAAGTTCAAGGATGGTGTAGCAGTTGAAGAACTCACTGAAGGGTTGGTGAAAATGGTCTCAGGGATTGAGCATGTTAAGTCCTTCCAATGGGGAAAAGATATCGGAGGACCTGATTTTCTGAGACAAGGCTTCACTCATGCTTTCTTGATGACTTTCAATGGGAAAGAGGAGTTTGATGCATTTCAGAGTCACCCAAATCATGTTGAGTTTTCCAAATTATTCTCACCTGCTGTTGAGAATATTTTAGTGCTGGATTTCCCACCTACCATTGTCAAAGCATAA 336 0.4196 MVWCCRDMMGGFNHYVVVKFKDGVAVEELTEGLVKMVSGIEHVKSFQWGKDIGGPDFLRQGFTHAFLMTFNGKEEFDAFQSHPNHVEFSKLFSPAVENILVLDFPPTIVKA* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0182 111 PANTHER - 9 111 IPR044662 -
Amo13g0182 111 PANTHER EXPRESSED PROTEIN 9 111 - -
Amo13g0182 111 Gene3D - 9 111 - -
Amo13g0182 111 ProSiteProfiles Stress-response A/B barrel domain profile. 12 104 IPR013097 -
Amo13g0182 111 SMART Dabb_2 12 106 IPR013097 -
Amo13g0182 111 SUPERFAMILY Dimeric alpha+beta barrel 8 106 IPR011008 -
Amo13g0182 111 Pfam Stress responsive A/B Barrel Domain 13 105 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0182 Amo-Chr13 2206381 2207571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0182 - - gmx:100306003 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0182 13 2206381 2207571 Amo13g0182 13 2206381 2207571 ECH
Amo18g0624 18 8710465 8711375 Amo13g0182 13 2206381 2207571 PCT
Amo13g0182 13 2206381 2207571 Amo18g0624 18 8710465 8711375 PCT