Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0581 ATGAGGGACATAATMTCATGTTTTAGTGAGAACGCAGTGAATGTGAGACAACAAGCTTCATGTTCTAGCTACTCATCATCAAGCAACGCTTGCATCAATCCAAGCCTCACACCTTCAACAAGAAACTCAGTTTCCTCTGTTTACAGATCAACACTCTCCAACAAGCACCAGATTCTGATGATCACAGTCACATGGTGCAAGAGCTTCTCCAATCAAGGACTCACTATAAGCTTTGGAACACAAGATCCACCATCACCACCTTTCAGGCTRAACACCAATTCAAGGTTCTTCAGGAAGAAGAAAGGAAGCAAATTGATGGTTGAATCTTCCAATCATGAGTCAAGAATTGAAGTCTTCTGGGATCTTTCCAATGCTAAATACGACACTGGACCTGAACCGGTTGATGGTTWCTATGTTGCGGTTGTTGTTGGTTTGGAAATAGCACTGATCATTGGTCACATAGCAGAAGAATCAGTTACCAAGAAGCTAAAAGCCATGGCAGCAACAAGTTCGGGTAAATTCTCATTGTTATCWAGAAGAGAYCATTGTTCAGGTAACACACTTTACACCACAAAGGCTCAGTTCTGTGAAAATGGAACGTGGCATGATATCATGATAAGGTGCAGTGGTGGAAATGGAAATGAAGGGTTGTTAAAGTCTTCTTCGTCTTCGTCGCTGTCGTCGTCGCCGCCGGCTCTGATGGTTTGCATTGATAAGAAGACAGTGATCCGTGTCAAGAGGCTTCAGTGGAATTTCAGGGGAAATCAAACAATTTTTGTTGATGGTTTGCTGGTTGATTTACTTTGGGATGTTCATAACTGGTTCTTCAATCCTTCTTCTTCTTCTTCTTCTTCTGGGTATGCAGTGTTCATGTTCAGAACAAGGAGTGGTTTGGATAGCAGATTGTGGCTGCAAGAGAAGCCTTCACTCAAAGATAAAGATGCTCTTGAATTCTCATTCCTCATCTATGCTTGTAAGACTGCATAA 987 0.4184 MRDIISCFSENAVNVRQQASCSSYSSSSNACINPSLTPSTRNSVSSVYRSTLSNKHQILMITVTWCKSFSNQGLTISFGTQDPPSPPFRLNTNSRFFRKKKGSKLMVESSNHESRIEVFWDLSNAKYDTGPEPVDGXYVAVVVGLEIALIIGHIAEESVTKKLKAMAATSSGKFSLLSRRDHCSGNTLYTTKAQFCENGTWHDIMIRCSGGNGNEGLLKSSSSSSLSSSPPALMVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPSSSSSSSGYAVFMFRTRSGLDSRLWLQEKPSLKDKDALEFSFLIYACKTA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0581 328 Pfam Plant protein of unknown function (DUF868) 40 326 IPR008586 -
Amo18g0581 328 PANTHER EXPRESSED PROTEIN 1 327 IPR008586 -
Amo18g0581 328 PANTHER DUF868 FAMILY PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0581 Amo-Chr18 7838278 7839304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0581 1 326 EF-hand Containing Proteins AT3G04860 35.168 1.52e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0581 - - aip:107614530 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0581 18 7838278 7839304 Amo13g0184 13 2213217 2215410 PCT
Amo13g0184 13 2213217 2215410 Amo18g0581 18 7838278 7839304 PCT