Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0184 ATGAGGGACATAGTATCTTGTTTCAGTGAAAACGCAGTGAATGTGTCTAATTACACTTCATGTTCTTCAAGCTACGCATCAATCAACAACCCTTGCATCATTAACCAAACAACACTTTCTTCTTCATCACCTTCAATCCAAAACTCAGTTTCCAGTGTCTACAAATTGGTCCTCTCCACCTTGAAGCAGCTCTTGTTCACTGTCACATGGTGCAGAAGCCACTCCAACCAAGGACTCACCATAAGCTTCGGTAGTAATGAGGTTCATGACCCTTCATCAGCACCACCAACGTTTAGGCTCAACACAAATTCAAGGTTCTTTAGGAAGAAGAAAGGAAGCAAATTGATTGAGTTATGTGATGAATCATCATCGAAGATTGAAGTGTTTTGGGACCTGTCAAATGCAAGATATGAATCTGGGCCTGAACCAGTTGAAGGTTTCTATTTGGTGATCGTTGTTGACTCAGAAGTAGGCCTAGTCCTCGGCGGCGACGCGGCGGAGGAATTCACCTCAAAAAAGCTCAAATCGAACTCCATGGTAACGAAAACATCGCTGCTATCAAGGAGAGAGCATTGTTCAGGGACAACACAGTACACAACAAAGGCTCAATTCTGTGAAACTGGAACATTTCATGATGTGTTGATAAGGTGCACCATGGAGAATGAAGAAGGGGTGCACAGTAAGAATCACCACCACCACCATCCTCACCCTCACCCTGTTCTCTCTGTTTGCATTGATAAGAAGACAGTGATCCGCGTGAAGAGGCTTCAGTGGAATTTCAGAGGAAACCAAACAATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAATCCGAATGCAAATGCAGGTTCTGGTTATGCAGTGTTTATGTTCAGAACAAGAAGTGGCTTAGATAGCAGGTTGTGGTTAGAAGAGAAGACACCACACAAAGATAAAGACAGAATTGAATTCTCCTTGTTGATCTATGCCTGTAAGACCTCATAA 1008 0.4296 MRDIVSCFSENAVNVSNYTSCSSSYASINNPCIINQTTLSSSSPSIQNSVSSVYKLVLSTLKQLLFTVTWCRSHSNQGLTISFGSNEVHDPSSAPPTFRLNTNSRFFRKKKGSKLIELCDESSSKIEVFWDLSNARYESGPEPVEGFYLVIVVDSEVGLVLGGDAAEEFTSKKLKSNSMVTKTSLLSRREHCSGTTQYTTKAQFCETGTFHDVLIRCTMENEEGVHSKNHHHHHPHPHPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPNANAGSGYAVFMFRTRSGLDSRLWLEEKTPHKDKDRIEFSLLIYACKTS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0184 335 PANTHER DUF868 FAMILY PROTEIN 1 334 - -
Amo13g0184 335 PANTHER EXPRESSED PROTEIN 1 334 IPR008586 -
Amo13g0184 335 Pfam Plant protein of unknown function (DUF868) 46 333 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0184 Amo-Chr13 2213217 2215410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0184 1 334 EF-hand Containing Proteins AT5G28150 33.929 7.03e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0184 - - lang:109353379 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0184 13 2213217 2215410 Amo13g0184 13 2213217 2215410 ECH
Amo18g0581 18 7838278 7839304 Amo13g0184 13 2213217 2215410 PCT
Amo13g0184 13 2213217 2215410 Amo18g0581 18 7838278 7839304 PCT