Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0572 ATGGATATGGAGGGAGCAGAAGGAGTGAAGGTATTCATACCAGAGTCAATCCAGGGTGTGAGTAACCACTTGGCGGGGCAGATTCAGATGATATGGGAGGTTGTGAAGGCGCCATTGATAGTACCACTGTTGAAGCTTTCCGTCTACATTTCCTTAGCAATGGCGCTCATGCTTTTCATCGAGAGGCTCTACATGGGCATTGTCATCATCCTCGTGAAGCTCTTCTGGAAGAAACCGGAAAAACGCTACAATTATGAGCCCATCCAAGATGATGTCGAGCTTGGTAGCTCTAACTTCCCAGTCGTCCTCATCCAAATCCCAATGTTCAACGAAAGAGAGGTTTACAAGGTTTCGATTGGAGCAGCTTGTAATCTTTCTTGGCCTGCTGACCGTCTCGTGATCCAAGTCCTGGATGATTCTACCGACCCCGTGGTTAAGCAAATGGTGGAAATGGAATGTCAGAGATGGGCGAGCAAAGGGATAAACATAACGTACCAAATCAGAGAGAACAGAACGGGGTACAAAGCGGGTGCACTCAAAGAAGGTCTAAAACGTAGCTACGTCAAGCACTGTGAGTACGTGGCAATCTTCGATGCTGATTTCAGGCCTGAGCCTGATTTCCTCCGTAGAGCCGTTCCTTTCTTGATTGGCAACCCTGACATCGCACTTGTTCAAGCTCGCTGGAGATTTGTGAATGCTGACGAGTGTTTGCTGACAAGAATGCAAGAGATGTCCCTTGATTACCATTTCACAGTGGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTTGGTTTCAATGGGACAGCAGGTATTTGGAGAATTGGTGCAATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACCGTGGAGGACATGGATCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTGTCTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCAAGTACTCTGAGGGCCTTCAGGTTCCAGCAACACAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGTGATGGAGATTGTAAGGAACAAGAAAGTGAGATTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTAGAAAGATCATAGCTCACATGGTCACATTCTTCTTCTACTGTGTTGTGCTTCCACTCACAATCTTGGTCCCTGAGGTTCATGTTCCAATCTGGGGTGCTGTTTATATCCCTTCCATCATCACCATCCTCAATTCAGTTGGAACACCAAGGTCAATTCACCTGCTGTTCTACTGGATCCTTTTTGAGAATGTGATGTCATTGCATCGAACAAAAGCAACATTCATAGGTCTGTTAGAAGCTGGGAGAGCCAATGAGTGGGTTGTTACTGAGAAACTTGGTGATTCTGTCAATAACAAGAACAAAGATGCTTCCAAGAACAAAGCCAACAATAATGCCATCAAAGCACCAGTCAAGAAACCAAGATCCAGGTTTTTCGAAAGAGTTAACACGTTGGAGCTTGGATTTGCTGCATTCCTCTTCTTCTGTGGATGCTATGACTTTGTGCATGGAAAGAACAACTACTTTATTTACCTATTCCTTCAGACCATAACCTTCTCAATTGTTGGATTTGGCTACGTTGGTACCATTGTCTAA 1638 0.4512 MDMEGAEGVKVFIPESIQGVSNHLAGQIQMIWEVVKAPLIVPLLKLSVYISLAMALMLFIERLYMGIVIILVKLFWKKPEKRYNYEPIQDDVELGSSNFPVVLIQIPMFNEREVYKVSIGAACNLSWPADRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAVPFLIGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIGAINEAGGWKDRTTVEDMDLAVRASLRGWKFVYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNKNKDASKNKANNNAIKAPVKKPRSRFFERVNTLELGFAAFLFFCGCYDFVHGKNNYFIYLFLQTITFSIVGFGYVGTIV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0572 545 Pfam Glycosyl transferase family group 2 193 402 IPR001173 -
Amo18g0572 545 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 381 IPR029044 -
Amo18g0572 545 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 319 IPR029044 -
Amo18g0572 545 PANTHER - 10 545 - -
Amo18g0572 545 CDD CESA_CaSu_A2 100 336 - -
Amo18g0572 545 PANTHER BNAC09G36340D PROTEIN 10 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0572 Amo-Chr18 7650645 7655555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0572 10 545 Miscellaneous Gene Families AT5G22740 82.123 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0572 K13680 - gmx:100802752 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0572 18 7650645 7655555 Amo18g0572 18 7650645 7655555 ECH
Amo18g0572 18 7650645 7655555 Amo13g0192 13 2275732 2278858 ECH