Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0192 AGCATAAACGTAGCTTTAAGAATGGGTGAGTTTGATTTGCAGCCGAAGTTCATGATCCCAGAGAGAATCCAGGGGGTGAGTTATGACATAGCAGGGCAGATAAAGATGATATGGGAAGTGATGAAAGCGCCATTGATAGTGCCAATGCTGAAGCTTGGAGTGTACATTTGCCTTGCAATGTCGCTGATGCTGTTCATGGAGAGACTATACATGGGAATCGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGCAGCGTTACAAGTATGAACCCATCCAAGATGATCTTGAACTTGGAAGCTCCAATTTCCCTGTAGTTCTCATTCAGATTCCAATGTTCAATGAGAAAGAGGTATACAAGGTGTCAATTGGTGCAGCTTGTAATCTTTCATGGCCTGCTGATCGTCTTGTCATCCAAGTTCTTGATGATTCTACTGACCCTGCAATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGGAAGTAAAGGCATAAACATAACATACCAAATAAGAGAGAACAGAACAGGATACAAAGCAGGTGCACTTAAAGAAGGTTTAAAGCGTAGCTATGTCAAACACTGTGAATACGTTGCAATATTCGATGCTGATTTCAGGCCTGAACCTGATTTCTTGAGAAGAGCCATTCCCTTCTTGGTTGGCAATCCTGACATAGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATGCGGACGAGTGTTTGTTGACAAGAATGCAAGAGATGTCGTTGGATTACCATTTCACGGTGGAGCAAGAAGTTGGGTCAGCAACACATGCTTTCTTTGGTTTCAATGGGACAGCGGGTGTATGGAGAATAGCAGCAATTAATGAGGCTGGTGGCTGGAAAGATAGGACCACTGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGCTGGAAATTCTTGTACCTTGGTGACCTTCAGGCCAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGTTGGTCTTGTGGTCCTGCTAATCTCTTCCGCAAAATGGTCATGGAGATAGTAAGAAACAAGAGAGTGAAGTTTTGGAAGAAAGTGTACGTGATATACAGCTTCTTCTTTGTACGTAAGATCATAGCTCACATGGTGACATTCTTCTTCTACTGTGTGGTGCTTCCCCTGACAATTCTGGTCCCTGAGGTTCATGTTCCAATTTGGGGTGCTGTTTATATTCCTTCCATCATCACCATCCTCAATTCAGTAGGAACACCGAGGTCCATTCACTTGTTGTTCTATTGGATCCTTTTTGAGAATGTCATGTCTTTGCACCGAACCAAGGCTACATTTATTGGTTTGCTTGAAGCTGGCAGAGCCAATGAATGGGTTGTCACTGAAAAACTTGGAGATTCTGTCAACAACAACAAGAACAAAACAGCAGGAGATGCTGCTAAGAAGACTAATGTCAAATCCCCCAAAAGAACTAGATCCAAATTTGTCGAAAGGTTTGTTCTTATTATTATTATTTAA 1524 0.4298 SINVALRMGEFDLQPKFMIPERIQGVSYDIAGQIKMIWEVMKAPLIVPMLKLGVYICLAMSLMLFMERLYMGIVIILVKLFWKKPEQRYKYEPIQDDLELGSSNFPVVLIQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPAIKQMVEMECQRWGSKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKRVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKTAGDAAKKTNVKSPKRTRSKFVERFVLIIII* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0192 507 Pfam Glycosyl transferase family group 2 199 407 IPR001173 -
Amo13g0192 507 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 97 325 IPR029044 -
Amo13g0192 507 PANTHER BNAC09G36340D PROTEIN 14 479 - -
Amo13g0192 507 PANTHER - 14 479 - -
Amo13g0192 507 SUPERFAMILY Nucleotide-diphospho-sugar transferases 103 387 IPR029044 -
Amo13g0192 507 CDD CESA_CaSu_A2 106 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0192 Amo-Chr13 2275732 2278858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0192 13 495 Miscellaneous Gene Families AT5G22740 83.023 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0192 K13680 - gmx:100802752 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0192 13 2275732 2278858 Amo13g0192 13 2275732 2278858 ECH
Amo18g0572 18 7650645 7655555 Amo13g0192 13 2275732 2278858 ECH