Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0526 ATGGTGGAACAACAGCACAAAAACCAGAGACCCCCAAAGAGTAGTAGTAGTAGTAGGGGCTTGTATGTGAAGATGAACCTCTTTCATCACAAACATGGCTACAACTACAACAAGCTCAATCAGCATTATCAACAGCAACAACAAGATAGAAGCTGCTTCTGCAGATACTACAAATGGCTTCTATGGCTCTCTCTCTCCCTCTACTTCTTCACCTCTTTTCTCATCACCAATAACAACAACACCACCGCCCAAAAGACAGAACCAACCGAGAACTTCGTTAAATCCCATGTTGTACCTCGTACACTGTTAGAATCCAGCAACATTGCAAGCAAACTCAAGAATATGAAGGTGTTCATCTACGAGCTCCCATCAAAGTACAACACAGATTGGTTAACCAACGAGAGGTGCAGCACTCACTTGTTTGCGTCGGAAGTCGCCATTCACAGAGCACTCTTGACCAGCGACCTTCGAACCTTTGACCCCAACCAAGCTGACTTCTTCTTCGTCCCGGTCTACGTCTCCTGCAACTTCAGCACCGTCAATGGCTTCCCTTCAATCTCACACGCCCGCAACCTCATTTCCTCCGCGGTGCAACTCATCTCCACACACCACCCTTTCTGGAACCGCACCTCCGGATCCGACCACGTCTTCGTCGCTTCCCATGATTTTGGCGCTTGTTTCCACAATCTCGAAGATGTGGCCATGCAGCATGGGATACTGGAAATAATGAAGAACTCAATAGTGTTGCAGACGTTCGGCGTTGAGTACCAGCACCCGTGCCAACAAGTTGAGAATGTAGTCATACCGCCTTACGTGTCGCCGGAAAGTGTACGGAAGACTCTTGCTAAGAATTCTCCGGCGAACGGACGCAGAGACATTTTTGCGTTCTTCCGTGGGAAAATGGAGGTTCATCCTAAGAACATAAGCGGAAGGTTTTACAGCAAGAGAGTGAGGACGGTGATATGGCGTAAATTCAGCGGTGACCGGAGATTTTACCTCAAGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATAGCGAGGTCTGTTTTCTGTTTGTGTCCACTTGGGTGGGCCCCATGGAGTCCCAGACTGGTTGAGTCTGTTTTATTAGGATGCGTGCCCGTAATTATCTCAGACGGTATTCGGTTACCGTTTTCGTCTGCCGTGAGGTGGCCGGATATTTCCGTTAGGGTGGCCGAGAGGGACGTCGGGAAGCTTGGGAGGATCCTTGAGCGCGTGGCAGCGACGAACCTCACGGCGATTCAGAGGAACCTGTGGGACCCGAGAACGAGGCGGGCCCTGATGTTCAACGAGGAGGTGCAGGAAGGGGATGCCACGTGGCAGACTCTGGTTAGTCTGAGTGAGAAGCTTGGTAGGTCTTACGGTAGGTCTACAGTTTCTGGCGAATTGGAGAGTGACACGTAA 1425 0.5025 MVEQQHKNQRPPKSSSSSRGLYVKMNLFHHKHGYNYNKLNQHYQQQQQDRSCFCRYYKWLLWLSLSLYFFTSFLITNNNNTTAQKTEPTENFVKSHVVPRTLLESSNIASKLKNMKVFIYELPSKYNTDWLTNERCSTHLFASEVAIHRALLTSDLRTFDPNQADFFFVPVYVSCNFSTVNGFPSISHARNLISSAVQLISTHHPFWNRTSGSDHVFVASHDFGACFHNLEDVAMQHGILEIMKNSIVLQTFGVEYQHPCQQVENVVIPPYVSPESVRKTLAKNSPANGRRDIFAFFRGKMEVHPKNISGRFYSKRVRTVIWRKFSGDRRFYLKRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVLLGCVPVIISDGIRLPFSSAVRWPDISVRVAERDVGKLGRILERVAATNLTAIQRNLWDPRTRRALMFNEEVQEGDATWQTLVSLSEKLGRSYGRSTVSGELESDT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0526 474 Pfam Exostosin family 113 412 IPR040911 -
Amo18g0526 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 45 466 IPR004263 GO:0006486|GO:0016757
Amo18g0526 474 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 45 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0526 Amo-Chr18 6975106 6977112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0526 K20889 - gmx:100797984 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0526 18 6975106 6977112 Amo18g0526 18 6975106 6977112 ECH
Amo18g0526 18 6975106 6977112 Amo13g0254 13 3595501 3597756 PCT
Amo13g0254 13 3595501 3597756 Amo18g0526 18 6975106 6977112 PCT