Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0254 ATGAAGCTCCAAAGTCACAACCACAACAACCATGGTGCCAACAAAACCACTTCCTTCTACAAATGGCTCCTCTGCCTCTCTCTTTCTCTCTACTTCTCCACCTCCTACCTCATCACCACTTCACCACCACCACCCTCACCATCACAACCACCACACAACACAAAACCCTCCCCCCAGAGAACTCTCTTTGAAACTCCATGGTCGTCGTCCCTCAAGAATCTCAGGATCTTTGTTTATGATCTTCCTTCAAAGTTCAACACAGATTGGTTGACCAACCAAAGGTGCAGCACGCACTTGTTTGCATCCGAGGTTGCAATCCACCGTGCCTTGTTGACCAGCCACGTCAGAACCTTTGACCCTTACGACGCTGACTTCTTCTTCGTCCCCGTCTACGTTTCCTGCAACTTCAGCACCGTTAATGGTTTCCCCGCCATAGGCCACGCCCGCTCCCTTATCTCCTCCGCTGTTAAACTCATCTCCGATCGCTTCCCTTTCTGGAACCGCAGCCATGGGCGTGACCATGTCTTCGTCGCCTCCCACGATTTCGGCTCCTGCTTCCACACCCTCGAGGACGTGGCGATTGCGGATGGCGTGCCGGAGATAATGAGGAAATCGATCGTGTTGCAGACGTTTGGCGTGACATATAAGCACCCGTGTCAGGAGGTTGAGAACGTCGTCATACCGCCGTACGTGTCGCCGGAGAATTTGCGGACCACCGTCGACAAGCTCCCGGCGAATTGGCAGCGAGATATTTGGGTGTTCTTCCGCGGCAAAATGGAGGTCCATCCTAAGAATGTTAGCGGAAGATATTACAGCAAGAAAGTGCGAACGATGATATGGCGAAAGTTCAGCGGTGACCGGAGGTTTTACCTTCAGAGGCATAGATTTGCCGGTTACCAGTCAGAAATCGCGCGTTCGGTTTTCTGTTTATGTCCGTTGGGGTGGGCCCCATGGAGTCCAAGACTGGTAGAGTCCGTTGCCTTGGGCTGCGTGCCGGTCATCATAGCCGACGGCATCCGATTACCGTTCTCATCCGCCGTGAGATGGCCGGAGATATCGCTGACGGTGGCGGAGCGCGACGTCGGGAAACTGGCGGAGATACTTGAGCGCGTGGCGGCGACGAACCTCAGCGATATTCAGAGGAATCTGTGGGACCCAATGACTAAGAAGGCACTTTTATTCAACGAGAGGGTCCATGAAGGCGATGCCACGTGGCAGGTTTTGCGTTCATTGAGCGAGAAGCTTGATAGGTCCTTAAGAAGCTCCAGAGTTTCCCGCCAATTAGATTTTGCCACGTAG 1299 0.5335 MKLQSHNHNNHGANKTTSFYKWLLCLSLSLYFSTSYLITTSPPPPSPSQPPHNTKPSPQRTLFETPWSSSLKNLRIFVYDLPSKFNTDWLTNQRCSTHLFASEVAIHRALLTSHVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLISSAVKLISDRFPFWNRSHGRDHVFVASHDFGSCFHTLEDVAIADGVPEIMRKSIVLQTFGVTYKHPCQEVENVVIPPYVSPENLRTTVDKLPANWQRDIWVFFRGKMEVHPKNVSGRYYSKKVRTMIWRKFSGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFSSAVRWPEISLTVAERDVGKLAEILERVAATNLSDIQRNLWDPMTKKALLFNERVHEGDATWQVLRSLSEKLDRSLRSSRVSRQLDFAT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0254 432 Pfam Exostosin family 72 370 IPR040911 -
Amo13g0254 432 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 15 422 - -
Amo13g0254 432 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 15 422 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0254 Amo-Chr13 3595501 3597756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0254 K20889 - gmx:100782077 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0254 13 3595501 3597756 Amo13g0254 13 3595501 3597756 ECH
Amo18g0526 18 6975106 6977112 Amo13g0254 13 3595501 3597756 PCT
Amo13g0254 13 3595501 3597756 Amo18g0526 18 6975106 6977112 PCT