Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0501 ATGGAGAGACAAGGAACAGAAGATATGAAGAAGAAGCAATCAAAATTCAAGAGGATTTGTGTGTTTTGTGGTAGCAGCCCTGGTAACAAAGCTAGTTACAAGGATGCTGCCATTGAACTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGATTGATTTCTCAGGCTGTTTATGATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTTACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTTGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCATTACCTGGTGGCTATGGCACACTTGAGGAGCTTCTTGAGGTCATAACCTGGGCTCAACTTGGCATCCATGATAAACCGGTGGGGTTGCTGAATGTTGATGGATACTACAATTCATTCTTATCATTCATTGACAAAGCTGTGGAGGAAGGGTTCATCAGCCCCAAAGCTCGCCATATAATTGTGTCTGCCCCAACACCAAAAGACCTTGTCAAAAACATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAAGTGGGATCTGA 636 0.4387 MERQGTEDMKKKQSKFKRICVFCGSSPGNKASYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLSFIDKAVEEGFISPKARHIIVSAPTPKDLVKNMEEYFPQHERVASKLSWESGI* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0501 211 Gene3D - 5 193 - -
Amo18g0501 211 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 209 - -
Amo18g0501 211 PANTHER LOG FAMILY PROTEIN YJL055W 8 209 - -
Amo18g0501 211 Pfam Possible lysine decarboxylase 61 191 IPR031100 -
Amo18g0501 211 TIGRFAM TIGR00730: TIGR00730 family protein 17 194 IPR005269 GO:0009691|GO:0016787
Amo18g0501 211 SUPERFAMILY MCP/YpsA-like 15 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0501 Amo-Chr18 6493585 6500203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0501 K22522 - gmx:100811156 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0501 18 6493585 6500203 Amo18g0501 18 6493585 6500203 ECH
Amo18g0501 18 6493585 6500203 Amo13g0292 13 4047964 4052766 ECH
Amo18g0501 18 6493585 6500203 Amo13g0292 13 4047964 4052766 PCT
Amo13g0292 13 4047964 4052766 Amo18g0501 18 6493585 6500203 PCT