Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0292 ATGATGGAGAGAGAAGAAAAAGAAGAACAAGAACAACAACTAGAAGAAGAAGAAGAAGAATCATCAAGGTTCAAGAGGGTATGTGTGTTTTGTGGTAGTAGCCCTGGGAACAAGAGTAGCTATAAGGATGCTGCTATTGACCTTGGCAAAGAACTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGCTTGATGGGATTGGTTTCTCAGGCTGTTTATGATGGAGGTCGCCATGTTATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTAAAAGCAGTGGCAGGCATGCATCAAAGAAAGGCAGAGATGGCTAAGCATTCTGATGCCTTCATTGCTTTACCAGGTGGCTATGGAACTCTTGAGGAGCTTCTTGAGGTCATAACATGGGCTCAGCTTGGAATCCATGACAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCGTTATTGTCTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATCGTATCTGCCCCTTCACCAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGTTAAGCTGGGAAGCTGAGCAAGTAGGATCATACACCTCAAATTGTGACATCTCAAGGTGA 696 0.4368 MMEREEKEEQEQQLEEEEEESSRFKRVCVFCGSSPGNKSSYKDAAIDLGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSPKELVKKMEEYSPQHERVASKLSWEAEQVGSYTSNCDISR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0292 231 PANTHER LOG FAMILY PROTEIN YJL055W 17 231 - -
Amo13g0292 231 TIGRFAM TIGR00730: TIGR00730 family protein 25 202 IPR005269 GO:0009691|GO:0016787
Amo13g0292 231 Pfam Possible lysine decarboxylase 69 199 IPR031100 -
Amo13g0292 231 MobiDBLite consensus disorder prediction 1 22 - -
Amo13g0292 231 SUPERFAMILY MCP/YpsA-like 23 202 - -
Amo13g0292 231 Coils Coil 2 27 - -
Amo13g0292 231 Gene3D - 13 201 - -
Amo13g0292 231 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 17 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0292 Amo-Chr13 4047964 4052766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0292 K22522 - gmx:100819644 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0292 13 4047964 4052766 Amo13g0292 13 4047964 4052766 ECH
Amo18g0501 18 6493585 6500203 Amo13g0292 13 4047964 4052766 ECH
Amo18g0501 18 6493585 6500203 Amo13g0292 13 4047964 4052766 PCT
Amo13g0292 13 4047964 4052766 Amo18g0501 18 6493585 6500203 PCT