Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0490 ATGAGTGAGATCACTTCACCTTCGCCGGAAATTCAATCCAATTCGAGTTCTGCTAGCTCTGATAACGACCCTGACCCTCCCATCCACCTCCAGTTGCCTCCTCTCTCGTACTCCCTCTTCGACGCTGAACCCTCCGAACCAAACGGCGTCGTTCACGGATCCGCTTCTTCTGAACCTCCAAAACCCTCGCAGTCGCACGAGGTTGTGATTCGCGGCTCCTCCGAACCTGCCAGCCCTAGCAGCAGCGGTTACGCCGGGGAAAGAGGCAGCAGCAGCGCCACCAGCATCTCCGCTGCCGATGACCTAACTCACCACGAAATTGAGGAGCTCAGCATCCACGATGATCCCCTCCCTCCTCCAACTTCGCTCCCTGGGAAAAGGAATGCCGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTCTTTGTTCTCAGTCATTCTGGCAAACCTATATACTCTAGGTATGGGGATGAACACAAGCTTGCTGGGTTTTCAGCAACGTTGCAAGCTATCATTTCATTTGTGGAAAATGGGGGTGACCGTGTCAAATTGGTGAGGGCCGGAAATCATCAGGTGGTTTTTCTTGTGAAAGGGCCTATTTACTTAGTTTGCATTAGCTGCACAGAAGAGCCTTATGAGTCGTTAAGAGGGCAGTTGGAGCTTATCTATGGCCAGGTGATTGTTATACTGACAAAGTCAATAAACAGATGTTTTGAGAGGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACACCGTCTTCTCTTCACTAATTCATTCTTTTAATTGGAATCCGGCTACATTTCTTCATGCTTATACCTGTCTGCCCCTTACATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAGGATGTTGTGGATTCAGGTGTTCTGTTTGCAATACTAATGTGCAGGCACAAGGTAATCAGTCTAGTTGGTGCACAGAAAGCCACACTTCATCCAGATGATATGCTACTGCTGGTCAACTTCATTATGTCAACAGAATCCTTTAGGACATCTGAATCATTTTCACCTGTTTGCTTGCCAAGATACAATCCTCTGGCATTTTTGTATGCTTACATCCATTATTTTGACGATGATACATACTTGATGTTGCTGACCACTCGTTCAGATGCTTTTTACCATCTCAAGGATTGCAGGATTCGTATCGAAACCGTCCTGTTGAAGTCCAATGTCCTTAGTGAAGTTCAGAGATCTTTGCTAGATGGTGGAATGCGTGTTGAAGATCTGCCACCCTTACCTCCTCATTCTGGATCATCATCTCATCTGGTCTATCCCGGGCTTCCAACAGATTCTCCTTATAGATCGAGAGAACCGGGTTCTGGCACTGGTGGTGCTGCTGGTTTGTGGCATTTCATATACCGAAGTATATTTCTGGATCAATACGTATCTTCAGATTTCTCATCACCAGTGAACAGTCCTCGGCAGAAGAAAAGGCTATATAGAGCTTACCAGAAGATTTTTTCTTCAATGCATGATAAAGGAATTGGCCCTAACAAAACTCAGTTTAGAAGGGATGAAAACTATGTTCTGCTCTGTTGGGTAACACAGGATTTTGAGCTTTACGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATAGGGTTTGTCAATGGGTAAAAGATGTTGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA 1731 0.4564 MSEITSPSPEIQSNSSSASSDNDPDPPIHLQLPPLSYSLFDAEPSEPNGVVHGSASSEPPKPSQSHEVVIRGSSEPASPSSSGYAGERGSSSATSISAADDLTHHEIEELSIHDDPLPPPTSLPGKRNADEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGNHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIYGQVIVILTKSINRCFERNPKFDMTPLLGGTDTVFSSLIHSFNWNPATFLHAYTCLPLTYATRQAAGAILQDVVDSGVLFAILMCRHKVISLVGAQKATLHPDDMLLLVNFIMSTESFRTSESFSPVCLPRYNPLAFLYAYIHYFDDDTYLMLLTTRSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMRVEDLPPLPPHSGSSSHLVYPGLPTDSPYRSREPGSGTGGAAGLWHFIYRSIFLDQYVSSDFSSPVNSPRQKKRLYRAYQKIFSSMHDKGIGPNKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0490 576 MobiDBLite consensus disorder prediction 1 24 - -
Amo18g0490 576 MobiDBLite consensus disorder prediction 57 97 - -
Amo18g0490 576 PANTHER BNAC04G15860D PROTEIN 63 576 - -
Amo18g0490 576 PANTHER SAND PROTEIN-RELATED 63 576 IPR004353 GO:0006623
Amo18g0490 576 Pfam Third Longin domain of FUZ, MON1 and HPS1 462 562 IPR043970 GO:0016192
Amo18g0490 576 Pfam Second Longin domain of FUZ, MON1 and HPS1 304 395 IPR043971 GO:0016192
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 143 160 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 323 339 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 195 209 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 299 312 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 554 574 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 246 258 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 541 554 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 376 402 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 525 539 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 348 371 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 275 296 IPR004353 GO:0006623
Amo18g0490 576 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 161 181 IPR004353 GO:0006623
Amo18g0490 576 MobiDBLite consensus disorder prediction 1 97 - -
Amo18g0490 576 MobiDBLite consensus disorder prediction 110 134 - -
Amo18g0490 576 Pfam First Longin domain of FUZ, MON1 and HPS1 143 264 IPR043972 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0490 Amo-Chr18 6331385 6337037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0490 K20195 - gmx:100814534 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0490 18 6331385 6337037 Amo18g0490 18 6331385 6337037 ECH
Amo18g0490 18 6331385 6337037 Amo13g0308 13 4224871 4229311 PCT
Amo13g0308 13 4224871 4229311 Amo18g0490 18 6331385 6337037 PCT