Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0346 ATGGTTGTAGCCAATGCAATCAAAGGCCTAGTTTCTGTTTTAGTGATTATGGTGTTGATTTTACCACAAATTGCTGCTCAAGTTCTTCCACCAGCTGATTCTCCATCAGATAATGCACCAGAACAGATTTGGCAGCTTGATAATACTGTTAGAGTGGATCCTTTAGATAATTTAAGAAAGTACAAAGGAGGATTTGACATCACCAACAAGCACTATTGGAGTTCAGTGATCTTCACAGGAGTTTATGGATATGCAATTGGGATCCTCTTCCTTTTTTGTGGAACATTATATGGAGGTTGTTTGTTAGTAACAACCAAGTTCTATGGCAAAAGTGAGAAACCAAAAAGGGTGAAGAATGTGTTTCCTTACAAGAGTTTTGATCTTTCAATTATCACTTTGGCTATATTGCTCACCATATTAGCCATAGTTGCAACTGGGCTTGTTCTTGCTGGGAGTGCAAGATTCCATTCTGAAGCAGAAAGTTCAGTTGGAATTATAATAAAGACAGCAAATGAGGCATCAGAGACAATAAACAACACAGCAGGAGCATTAAAAGACATGGAAAGTAACTTGATGGAAGACAATGTCAATAATGCTGTGGTTTCTGTGAGACTTGACTCAACAACTGAGAGGCTTGATGATGCATCTGCAAATATTGAAAAGGAAGCTAGCAAGAATAGGCGCCTTATCAACAAGGGCTTGAAACTTGTATTTGTGATTACCATTGTGATTATGAGCTTCAACTTGGTTGCAGTGACAGTTTTGTCAGTTTCCGGAGTACTGAGGTTGCGACGAGCACTTTACTTGTTAATCACACTTTGCTGGTTGATGACAGTGATATGCTGGATATTCTTTGGGATCTATTTCTTCTTAGAAAAATTTTCTGGTGATGCTTGCACAGCACTTGACAACTTTCAAGAAAATCCATACAATAACAGCTTAAGTTCCATACTTCCTTGTGATGAATTGCTCTCAGCAAAATCAGTCCTGTCTGGTGTTAGTGCTGGAATCTATAACCTTGTAAATAAGGTGAATGAAAACATATCAGGCATGCAGGCAACATCATATCCAAATCTTGTTCATGTTTGCAACCCTTTCTCGGCGCCGCCGGAGTATCTATACCAGCCACAGAACTGCCCTGCCAACACCATAAGAATAGGAGACATTGCAAAGGTACTAAAGCCTTTTACATGTTCTGATGGAACATGTGACAGTGAAAGTGGAAGCAGTTTCATAATAAGTGGAAGTGAATATGTGAGAGTTGAAGCATTCACAAGTTCAATTCAGGACTTACTAAATGTATATCCAAGCATGGAGAACTTGTTGGAATGCCAGCTTGTGAAGGATGCATTCTCTGAAATTCTTGTCAAACACTGCAATCCATTGAAGAGATATGCAAAGATGGTGTGGTCTGGAATGGTTCTTGTTGCTGTGATCATGCTGGTTTTGGTTCTACTGTGGACTCTAAAGGCTCATGTTTCATATGGTTCTGTTGAGCCACAATGTGCAACACAACCCAGTAACTTGGAATTAGGCTCCACTAAAGTTGTTAATAACAACTATAACAACAAAGTCGTATCCCACTAG 1587 0.3938 MVVANAIKGLVSVLVIMVLILPQIAAQVLPPADSPSDNAPEQIWQLDNTVRVDPLDNLRKYKGGFDITNKHYWSSVIFTGVYGYAIGILFLFCGTLYGGCLLVTTKFYGKSEKPKRVKNVFPYKSFDLSIITLAILLTILAIVATGLVLAGSARFHSEAESSVGIIIKTANEASETINNTAGALKDMESNLMEDNVNNAVVSVRLDSTTERLDDASANIEKEASKNRRLINKGLKLVFVITIVIMSFNLVAVTVLSVSGVLRLRRALYLLITLCWLMTVICWIFFGIYFFLEKFSGDACTALDNFQENPYNNSLSSILPCDELLSAKSVLSGVSAGIYNLVNKVNENISGMQATSYPNLVHVCNPFSAPPEYLYQPQNCPANTIRIGDIAKVLKPFTCSDGTCDSESGSSFIISGSEYVRVEAFTSSIQDLLNVYPSMENLLECQLVKDAFSEILVKHCNPLKRYAKMVWSGMVLVAVIMLVLVLLWTLKAHVSYGSVEPQCATQPSNLELGSTKVVNNNYNNKVVSH* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0346 528 PANTHER OS11G0264500 PROTEIN 15 517 - -
Amo18g0346 528 Coils Coil 170 190 - -
Amo18g0346 528 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 15 517 IPR040283 -
Amo18g0346 528 Coils Coil 205 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0346 Amo-Chr18 4671124 4673635 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0346 - - gmx:100805495 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0346 18 4671124 4673635 Amo13g0628 13 7779385 7783199 PCT
Amo13g0628 13 7779385 7783199 Amo18g0346 18 4671124 4673635 PCT