Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0628 ATGGCCATCTTTAACAATGGCCTAGCATATACTATTGTGATTGTAGTTTTGATTTCTCCAGAAATTACAACACAAGTTGTCTCCCCTCCTCCTGATTCTCCACCAGGTAATGTGTCAGAACCAATTAGACCTAAAGACAACACTGTAAGAGTGGACCCATATGATAACTTCAAAAAATATAGAGGAGGCTTTAACATCACCAACAAGCATTATTGGAGTTCAGTTGTTTTCACAGGAGTATATGGATATGCAGTTGGGGTGCTATGGCTTTTGTGTGGAATTCTATGTGGACTTTTCTTCCTAATAATAAATTGTTGCTGCCAAAGTTTTGGTGGAAACAAGGGTTGTGATCTTTTACCAATTCCTCTGGCCATTTTGCTACTCATAATAGCTATGGCTGCAAGTGGGTTAGTTCTTGCTGGAAGTGCAAAATTCCGTTGTCATGCAAGTAGTTCAGTTAATGTTGTAATCAATACAGCAGATAAGGCATCAGGTATTATATTCAATATAACAGGAGCATTGAAAGGCATCCCAACTGAATTGGTGGATGCTGATATTGCTTCAAAGCTTAACACCACATCTCAGAGATTTGACACTGCTGCTCAAAATATCACACAAGAAGCTGCCAAGAATAGGCACATCATCAACATGGCTTTAAAAGCATTGAATTCTTCTGCATTAACTAGACATGAGTCTCATAAAAATGTTGGAATTTTCTGTAGAGCAGTTTTTGGAGTACTAAGAGTTTGGAAGGCACTTTACCTATTTGTTGTGTTGTGCTGGTTGCTGACAGTGATATGCTGGATACTCTTTGGAGTTTATTTCTTCTTAGAAAAATTTTCTGATGATACATGCAATGCTCTATACAATTTTCAAGAAAATCCCTACAACAACAGCTTAAGTTCCATGATACCCTGTGATGAATTGCTCTCAGCAAAACCAATTGTATCTGAGTTTAGTTCAGGAATCTTCAACCTTGTCAATGAGGTGAATGGAGGCCTATCAAAATATCAGGGAGCACTCTTACCAAATCTACCAAATATATGCAATCCTTTTTCAGCACCACCTGATTTTTTATATCAGCCATGGAACTGCTCACCTGATTCTACTAAAATAGGAGATATCCCTGAGGTATTGAGGCCTTATACTTGTTTTGGTGATGAAGATGCAATCTGTGGCAAAGAAAAGTTCATACCAGGAAGTGAATATGAGGTGATTAAGGAATACACAAGTTCAGTTCAGAATCTATTGGATGTGTATCCTAGCATTGAAAGCTTGTTAGGATGCCAATTAGTGAAAGATGCATTCTCTCAAGTGCTTCAAAAACACTGCAAACATTTGAAGAGATTTAGTAAGGTGACTTGGGCAGCAATGGTGTCTCTTGCAGCAACCATGGTGCTTTTGGTTGTGTTATGGACTATGAAAGCTAATTATCATGAGCATAGTCATCAACCTTAG 1458 0.3813 MAIFNNGLAYTIVIVVLISPEITTQVVSPPPDSPPGNVSEPIRPKDNTVRVDPYDNFKKYRGGFNITNKHYWSSVVFTGVYGYAVGVLWLLCGILCGLFFLIINCCCQSFGGNKGCDLLPIPLAILLLIIAMAASGLVLAGSAKFRCHASSSVNVVINTADKASGIIFNITGALKGIPTELVDADIASKLNTTSQRFDTAAQNITQEAAKNRHIINMALKALNSSALTRHESHKNVGIFCRAVFGVLRVWKALYLFVVLCWLLTVICWILFGVYFFLEKFSDDTCNALYNFQENPYNNSLSSMIPCDELLSAKPIVSEFSSGIFNLVNEVNGGLSKYQGALLPNLPNICNPFSAPPDFLYQPWNCSPDSTKIGDIPEVLRPYTCFGDEDAICGKEKFIPGSEYEVIKEYTSSVQNLLDVYPSIESLLGCQLVKDAFSQVLQKHCKHLKRFSKVTWAAMVSLAATMVLLVVLWTMKANYHEHSHQP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0628 485 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 36 483 IPR040283 -
Amo13g0628 485 PANTHER OS11G0264500 PROTEIN 36 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0628 Amo-Chr13 7779385 7783199 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0628 - - ahf:112769145 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0346 18 4671124 4673635 Amo13g0628 13 7779385 7783199 PCT
Amo13g0628 13 7779385 7783199 Amo18g0346 18 4671124 4673635 PCT