Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3156 ATGCCCCCAGCGATGGCAGTTATCGGTAACACCTCATTATTCTCTAACCTCACGCTCTCTCCTTCGCTCAACCGCTCCACGCGCCTCTTCTTCATCTCTGTTGCTTTCTCTCCCACCAACTTTCGCCTTCGAGCTGCCTCTGCTTCTTCTTCTCCTTCTTCCACTGCTACTTTCGTCGACACCAACCCAACCGATTCCATCGTTGCAGAGAAGGAGAAGGAGAAGGAGAACGAAGTGAAGCACAGCAGCAACTTATTGGCTTGTCCGGTTTGTTACGACTCCTTGAATTGGACTAGTCATCCTTCCTTATCAGTAGATGCTATAGCTGGGTCTAGTTTACAATGTGGAACGTGTAAGAAAACATATGTTGGAAACCAAACGCATCTAGACCTCACGGTAACAACCGGAGCCAAAAGCTATGGTGAACCTATGCCATTTACCACAGAGTTTTTCAGGTTGCCATTGATATCAGCTCTCTATGAGAGAGGCTGGCGCCAAAGTTTTGTATGGGGTGGTTATCCAGGTCCTGAGAAAGAGTTTGAACTAATGAAGGAGTTCTTAAAGCCAGTATTGGGTGGAAATATCATCGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAGAGTGGATGGTTTTCTTTGGTTGTTGCTCTAGACTACTCAGAAAACATGTTGAAACAGTGTTATGAATTCATTCAGCAGGAAGAGAACTTTCCAAAAGATAGTGCATCTGTTGTTAGGAACATCACCTTGGTTAGAGCAGACATATCAAGACTCCCTTTTGTTTCAAGTTCTGTCGATGCAGTGCATGCGGGTGCAGCTCTCCACTGTTGGCCTTCACCTTTAGCAGCTGTAGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTCTTTGTTGCAACCACCATAATAATTGATGGGCCTTTCATTGTTGTCCCATTTAGAAGTACTTTCAGTCAGAGTTTTAAGCAAGTATCCGGAAGTAACTTATTTCTCTCTGAACGTGAACTTGAAGAACTCTGCAGTGCCTGCGGGCTGGTTGGATTTAAATGCATCAGAAATGGATTTTTTGTGATGATTTCTGCTACCAAACCAAGTTAA 1110 0.4396 MPPAMAVIGNTSLFSNLTLSPSLNRSTRLFFISVAFSPTNFRLRAASASSSPSSTATFVDTNPTDSIVAEKEKEKENEVKHSSNLLACPVCYDSLNWTSHPSLSVDAIAGSSLQCGTCKKTYVGNQTHLDLTVTTGAKSYGEPMPFTTEFFRLPLISALYERGWRQSFVWGGYPGPEKEFELMKEFLKPVLGGNIIDASCASGLFSRLFAKSGWFSLVVALDYSENMLKQCYEFIQQEENFPKDSASVVRNITLVRADISRLPFVSSSVDAVHAGAALHCWPSPLAAVAEISRVLRPGGVFVATTIIIDGPFIVVPFRSTFSQSFKQVSGSNLFLSERELEELCSACGLVGFKCIRNGFFVMISATKPS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3156 369 CDD AdoMet_MTases 194 308 - -
Amo17g3156 369 Gene3D Vaccinia Virus protein VP39 156 360 IPR029063 -
Amo17g3156 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 156 359 IPR029063 -
Amo17g3156 369 PANTHER METHYLTRANSFERASE 42 368 - -
Amo17g3156 369 Pfam Methyltransferase domain 197 302 IPR013216 GO:0008168
Amo17g3156 369 PANTHER OS08G0411200 PROTEIN 42 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3156 Amo-Chr17 136014074 136016953 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3156 - - pvu:PHAVU_009G030200g 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3156 17 136014074 136016953 Amo17g3156 17 136014074 136016953 ECH
Amo08g1029 08 17589791 17592667 Amo17g3156 17 136014074 136016953 hybridization