Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1029 ATGCCCCCAGCGATGGCAGTTATCGGTAACACCTCATTATTCTCTAACCTCACGCTCTCTTCTTCGCTCAACCGCTCCACGCGCCTCTTCTTCATCTCTGTTGCTTTCTCTCCCACCAACTTTCGCCTTCGAGCTGCCTCTGCTTCTTCTTCTCCTTCTTCCACTGCTACTTTCGTCGACACCAACCCAACCGATTCCATCGTTGCAGAGAAGGAGAAGGAGAAGGAAGTGAAGCACAGCAGCAACTTATTGGCTTGTCCGGTTTGTTACGACTCCTTGAATTGGACTAGTCATCCTTCCTTATCAGTAGATGCTATAGCTGGGTCTAGTTTACAATGTGGAACGTGTAAGAAAACATATGTTGGAAGCCAAACGCATCTAGACCTCACGGTAACAACCGGAGCCAAAAGCTATGGTGAACCTATGCCATTAACCACAGAGTTTTTCAGGTTGCCATTGATATCAGCTCTCTATGAGAGAGGCTGGCGCCAAAGTTTTGTATGGGGTGGTTATCCAGGTCCTGAGAAAGAGTTTGAACTGATGAAGGAGTTCTTAAAGCCAGTATTGGGTGGAAATATCATCGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAGAGTGGATTGTTTCCTTTGGTTGTTGCTCTAGACTACTCAGAAAACATGTTGAAACAGTGTTATGAATTCATTCAGCAGGAAGAGAACTTTCCAAAAGATAGTGCATTTGTTGTTAGGAACATCACCTTGGTTAGAGCAGACATATCAAGACTCCCTTTTGTTTCAAGTTCTGTTGATGCAGTGCATGCGGGCGCAGCTCTCCACTGTTGGCCTAGACCTTTAGCAGCTGTAGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTCTTTGTTGCAACCACCATAATAATTGATGGGCCTTTCATTGTTGTCCCATTTAGAAGTACTTTCAGTCAGAGTTTTAAGCAAGTATCCGGAAGTAACTTATTTCTCTCTGAACGTGAACTTGAAGAACTCTGCAGTGCCTGCGGGCTGGTTGGATTTAAATGCATCAGAAATGGATTTTTTGTGATGATTTCTGCTACCAAACCAAGTTAA 1104 0.4393 MPPAMAVIGNTSLFSNLTLSSSLNRSTRLFFISVAFSPTNFRLRAASASSSPSSTATFVDTNPTDSIVAEKEKEKEVKHSSNLLACPVCYDSLNWTSHPSLSVDAIAGSSLQCGTCKKTYVGSQTHLDLTVTTGAKSYGEPMPLTTEFFRLPLISALYERGWRQSFVWGGYPGPEKEFELMKEFLKPVLGGNIIDASCASGLFSRLFAKSGLFPLVVALDYSENMLKQCYEFIQQEENFPKDSAFVVRNITLVRADISRLPFVSSSVDAVHAGAALHCWPRPLAAVAEISRVLRPGGVFVATTIIIDGPFIVVPFRSTFSQSFKQVSGSNLFLSERELEELCSACGLVGFKCIRNGFFVMISATKPS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1029 367 CDD AdoMet_MTases 192 306 - -
Amo08g1029 367 Gene3D Vaccinia Virus protein VP39 154 358 IPR029063 -
Amo08g1029 367 PANTHER OS08G0411200 PROTEIN 43 366 - -
Amo08g1029 367 Pfam Methyltransferase domain 195 300 IPR013216 GO:0008168
Amo08g1029 367 PANTHER METHYLTRANSFERASE 43 366 - -
Amo08g1029 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 154 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1029 Amo-Chr8 17589791 17592667 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1029 - - pvu:PHAVU_009G030200g 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1029 08 17589791 17592667 Amo17g3156 17 136014074 136016953 hybridization