Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3135 ATGTCCAGGCCTCTGTATAGAGGTGTATCAGGGGTTCGGACACCTGAACACAATCATGATTCTTGGGAGTCTCATAACAAAGATAAAGTAGATAAGGAAGATTTGGATAAAAAGGGTTCCTCAAATCACAGCTCTTTACCTCTGAAGTCTCCCTTAAAGTTGCTATTTTCAGATAATTCTCATTCTAAATTCGGCACCAATGAGAACGGTTACTCATCCGATCCACTCATTGGAACTGCGAGAAGCCGGCATAAATTGGTTCTGCATTTGTTGAAGTGTAGTTTAGTATTTCTAGTTATTCTTGCACTTGCTGGTTCGTTTTTGTGGACGGTGTCGATTTCGACCACATCAAGAGGTCAAATTTACCATGGTTATAGAAGACTCCAAGAGAAACTTGTGTCAGACCTGTTGGATATTGGGGAACTATCTAGTGCTCCCTCAAAGATGAAAGAGTTGGAATTTTGCTCGCCGGAGCTTGAAAACTATGTTCCTTGCTATAATATTAGTGATAATATGGGTTTGGGTAATTCTGATGGTGATCAGCTTGATCGGCAATGCGGCCCGGAGCTCAGGCAAAATTGTTTGATTCTCTCACCAACAAATTACAAAATTCCTCTTCGGTGGCCTACCGGAAGGGATGTTATATGGGTTGCTAATGTTAAGATCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGCTCAATGAAGAGCAAATTTCCTTTCGTTCAGCATCTCTTATGTTTGATGGTGTTGAAGATTACTCACATCAAATTGCAGAGATGATTGGACTCAGAAATGAATCTAACTTCATTCAAGCTGGGGTTAGAACCATTCTGGACATTGGCTGTGGCTATGGTAGTTTTGGAGCACACCTCTTTCAAAGTCAGCTCTTAACAATGTGCGTGGCTGACTATGAGCCTTCAGGCAGTCAAGTTCAACTCACACTTGAGAGAGGCCTGCCTGCTATGATTGCTTCTATCACTTCAAAACAATTGCCATTTCCATCTCTTTCGTTTGATATGTTGCATTGTGCTAGATGTGGCATTGATTGGGACCAAAAAGATGGCCTTCTCTTGATTGAAGCTGATAGACTGTTAAAACCGGATGGTTACTTTGTCTGGACATCACCGCTTGTAAACGCCCGAAACAAAGATAATCAAGAAAGGTGGAAGGTTATACATGATTTTACCGAAAATCTTTGCTGGGAAATGCTTTCACAGCAAGATGAAACTGTTGTATGGAAGAAAACCAGTAAAAGAAATTGCTACAGCTCAAGAAAGAATGGTTCTCCCCCTCCTTTATGTGGTAGAGGTTATGATGTGGAATCTCCATATTATCGGGAACTGAAAAACTGCATAGCAGGAACACACAGCAGCCGATGGATTTCTATTGATAAGAGGGCAACCTGGCCTTCTCGGGATAACTTGAACAAAGAAGAGCTTGCAATCCATGGTTTGCAATCCGATGAAATTATGGAGGACAATGAAAGCTGGAGAACAACAGTCCAGAACTATTGGTCTCTTTTGTCTCCATTAATATTTTCTGATCATCCTAAGAGGCCTGGGGAAGAGGACCCTCCACCACCTTACAACATGCTAAGAAACATTCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTGCTGCGTGCTGGGAAATCTGTGTGGGTCATGAATGTCATACCAATATCTGGGCCAAACTATCTCCCGTTGATTCACGATAGGGGTTATGTTGGTGTCTTGCATGATTGGTGTGAGGCTTTTCCAACGTACCCTAGAACCTACGATTTGGTGCATGCAGACGGACTTCTATCCCTCGAGACTTCTCAGCAGCGCAGATGCACTATGTTTGATATGTTTATTGAAATTGACAGGATACTTCGCCCTGAGGGATGGGTTATAATTCGCGACACAATTCCTTTAGTAGAGTCGGCGAGAGCTCTAATAGCGCGGTTGAAGTGGGATGCACGAGTTGTAGAAATCGAAAGCGACAGCCATCAAAGACTCCTGATCTGCCAGAAACCGTTCTTTAAGAGACAAGCAAATTGA 2073 0.4255 MSRPLYRGVSGVRTPEHNHDSWESHNKDKVDKEDLDKKGSSNHSSLPLKSPLKLLFSDNSHSKFGTNENGYSSDPLIGTARSRHKLVLHLLKCSLVFLVILALAGSFLWTVSISTTSRGQIYHGYRRLQEKLVSDLLDIGELSSAPSKMKELEFCSPELENYVPCYNISDNMGLGNSDGDQLDRQCGPELRQNCLILSPTNYKIPLRWPTGRDVIWVANVKITAQEVLSSGSLTKRMMMLNEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLFQSQLLTMCVADYEPSGSQVQLTLERGLPAMIASITSKQLPFPSLSFDMLHCARCGIDWDQKDGLLLIEADRLLKPDGYFVWTSPLVNARNKDNQERWKVIHDFTENLCWEMLSQQDETVVWKKTSKRNCYSSRKNGSPPPLCGRGYDVESPYYRELKNCIAGTHSSRWISIDKRATWPSRDNLNKEELAIHGLQSDEIMEDNESWRTTVQNYWSLLSPLIFSDHPKRPGEEDPPPPYNMLRNILDMNAHFGGFNSALLRAGKSVWVMNVIPISGPNYLPLIHDRGYVGVLHDWCEAFPTYPRTYDLVHADGLLSLETSQQRRCTMFDMFIEIDRILRPEGWVIIRDTIPLVESARALIARLKWDARVVEIESDSHQRLLICQKPFFKRQAN* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3135 690 MobiDBLite consensus disorder prediction 1 46 - -
Amo17g3135 690 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 20 688 IPR004159 GO:0008168
Amo17g3135 690 Gene3D Vaccinia Virus protein VP39 255 434 IPR029063 -
Amo17g3135 690 MobiDBLite consensus disorder prediction 13 40 - -
Amo17g3135 690 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 278 422 IPR029063 -
Amo17g3135 690 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 500 656 IPR029063 -
Amo17g3135 690 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 161 682 IPR004159 GO:0008168
Amo17g3135 690 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 20 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3135 Amo-Chr17 135678745 135684949 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3135 K23870 - gmx:100812530 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3135 17 135678745 135684949 Amo17g3135 17 135678745 135684949 ECH
Amo17g3135 17 135678745 135684949 Amo07g1733 07 49432122 49437663 hybridization
Amo17g3135 17 135678745 135684949 Amo17g3135 17 135678745 135684949 PCT
Amo07g1733 07 49432122 49437663 Amo17g3135 17 135678745 135684949 PCT
Amo17g3135 17 135678745 135684949 Amo07g1733 07 49432122 49437663 PCT