Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1733 ATGTCAAGACCTCTTCAGAGAGGTGTTTCTGGGATTCAGATCCCTGATTCCCAATCCAAAGAGAAAACAGAAAAAGAAGATTTGGATAAAAAGGCTCCCTCAGATCAAAGCCCTTCTTCTTTATGGCTTAGATTCCCTTTGAGGCTGCTCTTTGCAGATAGTAATAATAGTAACAATTCACCTTCTAAATATGGCAACATCACAGACAATGGTTTTGCTTCTGATCCGTTCATTGTTGGGTCCCCAAGAAGTCGGCTTAACTTGTTGCATTTCTTGAAGTTCAGTTTGCTGCTCATAGTTGTTCTTGCACTTACTGGATCCTTTTGGTGGACATTGTCGATTTCTTCCTCGTCGAGGGGTCATGTTTACCATGGTTACAGGAGGCTCCAAGAGAGGCTTGTTTCGGATTTGTTGGATATTGGTGAGTTTACTCGCGGTCCAGCGAAGTTAAAGGAATTGGAATTTTGTTCTCAGGAGTTTGAGAACTATGTTCCTTGCTTTAATGTTTCTGAGAACTTGGCTTTGGGAAATTCTGATGGCAATAAGCTTGATCGGCAATGTGGCCGCGAGCTCAGGCAAAATTGTTTGGTGCTTACGCCGGTGAATTATAAGATTCCGCTTAGGTGGCCTACTGGAAGAGATGTTATATGGGTAGCTAATGTGAAAATCACTGCACAGGAGGTTCTTTCTTCTGGGAGCTTGACAAAGAGGATGATGATGCTTGATGAAGAGCAAATTTCCTTTCGCTCCGCTTCTCTCATGTTTGATGGCGTCGAAGACTACTCGCATCAAATTGCGGAAATGATTGGACTTAGAAATGAGTCTAGCTTCCTACAAGCCGGGGTTCGAACAATACTGGATATTGGCTGTGGCTATGGTAGCTTTGGTGCGCACCTCTTTCAGAGTCAACTTTTGACGATGTGCGTAGCAAACTTTGAGCCTTCAGGAAGTCAAGTTCAGCTTACACTTGAGAGGGGTCTTCCAGCCATGGTTGCTTCTTTCACTTCAACACAGTTGCCATATCCATCGCTCTCCTTTGATATGTTACACTGTGCAAGATGTGGCATTGATTGGGACCAGAAAGGTGGCATTTTCTTGATTGAGGCTGATAGGCTTCTAAGACCTGGTGGATACTTTGTCTGGACATCGCCACTTACAAATGCTCGAAACAAAGAGAGTCAGAAAAGGTGGAAGTCTGTACAGGATTTTGCACAAAGTATTTGCTGGGAAATGTTGTCCCAGCAAGATGAAACTGCCGTATGGAAGAAAACTAGTAAAAAGAGTTGCTATAGTTCAAGAAAGCCTGGTTCTGGTCCTTCTTTGTGTGGTAAAAGTCATGATATAGAGACTCCATATTATCGAGTACTGCAAAATTGCATAGGAGGAACACAGAATAGCCGTTGGATTCCAATTGAAAAAAGAGAAACGTGGCCTTCTCGAGCTAACTTGAACAAGAACGAGCTTGCAGTCCATGGGTTGCAGTCTGATGAACTTGCCGAGGACACTGATAGCTGGAAAACAGCAGTCAACAATTATTGGTCGCTCCTGTCACCTTTAATATTTTCTGACCATCCGAAGAGGCCGGGCGAAGAGGACCCATCACCTCCTTACAACATGTTCAGGAATGTGCTCGACATGAATGCCGAGTTTGGTGGTTTCAATTTGGCATTGTTGCAAGCTAAAAAGTCTGTCTGGGTCATGAATGTGGTTTCAATGAGTGGGCCAAACCATCTTCCTTTGATCCAGGACAGAGGTTTCGTTGGCATTCTGCATGATTGGTGTGAGGCATTTCCATCATACCCTAGAACCTATGACTTGGTGCATGCAGCAGGACTTTTATCCCTTGAATTCGCCAAGCCCCGCAGATGCACTATGCTTGATCTGTTCATTGAAATTGACAGATTGCTTCGCCCAGAGGGTTGGGTTATCATTCGAGATACAGTTCCTTTAGTAGAATCAGCAAGAGCTCTAACGACTCAGCTGAAGTGGGATGCAAGGGTGATTGAAACCGAAAGTGACAGTGATCAAAGATTGCTGATCTGCCAGAAACCTTTCTACAAGAGACAATCAAGCTAA 2076 0.4403 MSRPLQRGVSGIQIPDSQSKEKTEKEDLDKKAPSDQSPSSLWLRFPLRLLFADSNNSNNSPSKYGNITDNGFASDPFIVGSPRSRLNLLHFLKFSLLLIVVLALTGSFWWTLSISSSSRGHVYHGYRRLQERLVSDLLDIGEFTRGPAKLKELEFCSQEFENYVPCFNVSENLALGNSDGNKLDRQCGRELRQNCLVLTPVNYKIPLRWPTGRDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESSFLQAGVRTILDIGCGYGSFGAHLFQSQLLTMCVANFEPSGSQVQLTLERGLPAMVASFTSTQLPYPSLSFDMLHCARCGIDWDQKGGIFLIEADRLLRPGGYFVWTSPLTNARNKESQKRWKSVQDFAQSICWEMLSQQDETAVWKKTSKKSCYSSRKPGSGPSLCGKSHDIETPYYRVLQNCIGGTQNSRWIPIEKRETWPSRANLNKNELAVHGLQSDELAEDTDSWKTAVNNYWSLLSPLIFSDHPKRPGEEDPSPPYNMFRNVLDMNAEFGGFNLALLQAKKSVWVMNVVSMSGPNHLPLIQDRGFVGILHDWCEAFPSYPRTYDLVHAAGLLSLEFAKPRRCTMLDLFIEIDRLLRPEGWVIIRDTVPLVESARALTTQLKWDARVIETESDSDQRLLICQKPFYKRQSS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1733 691 MobiDBLite consensus disorder prediction 18 33 - -
Amo07g1733 691 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 162 683 IPR004159 GO:0008168
Amo07g1733 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 280 430 IPR029063 -
Amo07g1733 691 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 689 IPR004159 GO:0008168
Amo07g1733 691 Gene3D Vaccinia Virus protein VP39 244 435 IPR029063 -
Amo07g1733 691 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 13 689 - -
Amo07g1733 691 MobiDBLite consensus disorder prediction 1 39 - -
Amo07g1733 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 500 650 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1733 Amo-Chr7 49432122 49437663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1733 K23870 - gmx:100787635 1149.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3135 17 135678745 135684949 Amo07g1733 07 49432122 49437663 hybridization
Amo07g1733 07 49432122 49437663 Amo17g3135 17 135678745 135684949 PCT
Amo17g3135 17 135678745 135684949 Amo07g1733 07 49432122 49437663 PCT