Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3113 ATGTGTTATTGTAGCGATGGTCGTTCAAATGAACACAGAAAAGCCGCAAACTCTGCACAACCGCCACTAACGGTGATACAACTGCCGAGGCGCGTGGCGGATCCATTTGCCATCCTGAGGAGGTTACTGATTGCCACCGTATCCTTCTTAGCGGTTACCACTCTCTTATTCGTCCATGTTCAAGTTCCATCTTCTTCTTCTTCTTCGTCTTCCTCTCACTCTCATCGTAACTACTTCACTGACAAGTTTCCCGCGTTTCATGATCCGCAAAGATGGACGAGAGAGCAAGCGCCGCCGTATTTATCCAAGGCTACATTTGCTGCTTCCAAGTTGAATGATTCAAGATGGGATTCAGATTATGAGAAACTGTGGAAGCCTCCACCAAATCATGGCTTTCTGCCCTGCACTAAGCCTACTCCTAATTATACAACTTATCCCGAATCGCGAGGTTACCTTTTAGTTCATACAAATGGAGGTCTCAACCAAATGCGTACCGGGATATGTGATATGGTAGTTGTAGCTCGCATTATAAACGCCACTCTTGTAATTCCGGAACTTGACAAGAAATCATTTTGGCAGGACAATAGCAATTTCTCTGATATCTTTGATGAAGAGTGGTTCATTAATTCTTTAGCTAATGATGTAAAAATCATTAAGAAGCTACCTAAAAATCTAGTTCATGCCACCAAAATGGTGATCCAATTCAAAAGCTGGTCTACAATGGATTACTATGAGAATGAGATTGCTTCCATGTGGGATTTTTACAAAGTTATTCGAGCTTCCAAAACTGATTCTCGGTTGGCAAATAACAAACTACCTTCGGATATTCAGAAGCTTCGCTGCCGAACTTGTTTTGAAGCTCTTCGTTTCTCTCCTCGAATTGAACAAATGGGGAAGATTTTGGTGGAGAGAATGAGATCATTTGGTCCTTATATCGCGTTACATTTACGCTATGAGAAGGATATGCTTGCATTTAGTGGTTGCACACATGATTTATCTACCGCCGAAGCTGAAGAGTTAAGGATTATAAGAGAGCGCACTGCATATTGGAAGAGGAAGCACGTTGATCCCATTGAAGAGAGGTCAAAAGGACTTTGCCCCTTAACTCCAAAAGAAGTTGGAATTTTTCTTACTGCTCTAGGATACCCTTCAAGTACTCCAATATACATTGCTGCTGGAGAAATATATGGGGGTGAGTCGCATATGGCTGAACTGCGATCGCGGTATCCATTGTTAATGAGCAAGGAAAAGCTTGCTTCCATTGAGGAGCTTGAACCCTTTTCCATCCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCGGTCGAAAGTGATGTTTTTGTACACTCTTACCCCGGAAACATGGCCAGGGCTGTCGAAGGTCATCGTCGTTTTCTCAGCCGTGGAAGGTCAATTTCTCCGGATAGGAAAGCCCTTGTTCATCTCTTTGATAAACTAGCTAATGGAAAAATGACAGAGGGGATAAATCTATCAAATAAAATTATTGATCTTCACCAAAAAAGGCAAGGCTTGTTAAGGAAGAGGAAAGGGCCCATTTCAGGAACAAAAGGGTTGGACAGGTTTCGATCTGAAGAAGCATTTTATTCGAATCCTTTACCTGATTGTATATGTCAAACACCAACACCAACTGCAAATGCTTCTCACGTTGTTAGGTAG 1680 0.4226 MCYCSDGRSNEHRKAANSAQPPLTVIQLPRRVADPFAILRRLLIATVSFLAVTTLLFVHVQVPSSSSSSSSSHSHRNYFTDKFPAFHDPQRWTREQAPPYLSKATFAASKLNDSRWDSDYEKLWKPPPNHGFLPCTKPTPNYTTYPESRGYLLVHTNGGLNQMRTGICDMVVVARIINATLVIPELDKKSFWQDNSNFSDIFDEEWFINSLANDVKIIKKLPKNLVHATKMVIQFKSWSTMDYYENEIASMWDFYKVIRASKTDSRLANNKLPSDIQKLRCRTCFEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSTAEAEELRIIRERTAYWKRKHVDPIEERSKGLCPLTPKEVGIFLTALGYPSSTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSIHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLSRGRSISPDRKALVHLFDKLANGKMTEGINLSNKIIDLHQKRQGLLRKRKGPISGTKGLDRFRSEEAFYSNPLPDCICQTPTPTANASHVVR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3113 559 PIRSF UCP009360 6 549 IPR024709 -
Amo17g3113 559 PANTHER OS02G0726500 PROTEIN-RELATED 28 557 - -
Amo17g3113 559 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 28 557 - -
Amo17g3113 559 CDD O-FucT_plant 151 472 IPR024709 -
Amo17g3113 559 Pfam GDP-fucose protein O-fucosyltransferase 151 466 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3113 Amo-Chr17 135160552 135164497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3113 95 546 Miscellaneous Gene Families AT1G22460 66.372 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3113 - - adu:107460899 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3106 17 135079709 135083729 Amo17g3113 17 135160552 135164497 PCT
Amo17g3113 17 135160552 135164497 Amo17g3106 17 135079709 135083729 PCT