Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3106 ATGTGTTATTGTAGCGATGGCCGTTCAAATGAACACAGAAAAGCCGCAAACTCTGCACAACCGCCACTAACGGTGATGCAACTGCCGAGGCGCGTGGCGGTTCCATTTGCCATCCTGAGGAGGTTACTAATTGCCACCGGATCCTTCTTAGCGTTTCGTGATCCGCAAAGATGGACGAGAGAGCAAGCGCCGCCGTATTTATCCAAGGCTACATTTGCTGCTTCCAAGTTGAATGATTCAAGATGGGATTCAGATTATGAGAAACTGTGGAAACCTCCACCAAATCATGGCTTTCTGCCCTGCACTAAGCCTACTCCTAATTATAGAACTTATCCCGAATCGCGAGGTTACCTTTTAGTTCATACAAATGGAGGTCTCAACCAAATGCGTACCGGGATATGTGATATGGTAGTTGTAGCTCGCATCATAAACGCCACTCTTGTAATTCCGGAACTTGACAAGAAATCATTTTGGCAGGACAATAGCAATTTCTCTGATATCTTTGATGAAGAGTGGTTCATTAATTCTTTAGCTAATGATGTAAAAATCATTAAGAAGCTACCTAAAAATCTAGTTCATGCCACCAAAATGGTGATCCAATTCAAAAGCTGGTCTGGAATGGATTACTATGAGAATGAGATTGCTTCCATGTGGGATTTTTACAAAGTTATTCGAGCTTCCAAAACTGATTCTCGGTTGGCAAATAACAAACTACCTTCGGATATTCAGAAGCTTCGTTGCCGAACTTGTTTTGAAGCTCTTCGTTTCTCTCCTCGAATTGAACAAATGGGGAAGATTTTGGTGGAGAGGATGAGATCATTTGGTCCTTATATCGCGTTACATTTACGCTATGAGAAGGATATGCTTGCATTCAGTGGTTGCACACATGATTTATCTACAGCCGAAGCGGAAGAGTTAAGGATTATCAGAGAGCACACTGCATATTGGAAGAGGAAGCACATTGATCCCATTGAAGAGAGGTTAAAAGGACTTTGCCCCTTAACTCCAAAAGAAGTTGGGATTTTTCTTACTGCTCTAGGATATCCTTCAAGTACTCCAATATACATTGCTGCTGGGGAAATATATGGGGGTGAGTCGCATATGGCTGAACTGCGATCGCGGTATCCATTGTTAATGAGCAAGGAAAAGCTTGCTTCTGTTGAGGAGCTTGAACCCTTTTCCATCCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCGGTCGAAAGTGATGTTTTTGTACACTCTTACCCGGGAAACATGGCCAGGGCTGTCGAAGGTCATCGTCGATTTCTCGGCCGTGGAAGGTCAATTTCTCCAGATAGGAAAGCCCTTGTTCGTCTCTTTGATAAACTAGCTAATGGAAAAATGACTGAGGGGATAAATCTATCAAATAAAATTATTGATCTTCATCAAAAAAGGCAAGGCTTGTTAAGGAAGAGGAAAGGGCCCATTTCAGGAACAAAAGGGTTGGACAGGTTTCGATCTGAAGAAGCATTTTATTCGAATCCTTTACCTGATTGTATATGTCAAACACCAACACCAACTGCAAATGCTTCTCACGTTGTTAGGTAG 1578 0.424 MCYCSDGRSNEHRKAANSAQPPLTVMQLPRRVAVPFAILRRLLIATGSFLAFRDPQRWTREQAPPYLSKATFAASKLNDSRWDSDYEKLWKPPPNHGFLPCTKPTPNYRTYPESRGYLLVHTNGGLNQMRTGICDMVVVARIINATLVIPELDKKSFWQDNSNFSDIFDEEWFINSLANDVKIIKKLPKNLVHATKMVIQFKSWSGMDYYENEIASMWDFYKVIRASKTDSRLANNKLPSDIQKLRCRTCFEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSTAEAEELRIIREHTAYWKRKHIDPIEERLKGLCPLTPKEVGIFLTALGYPSSTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASVEELEPFSIHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRSISPDRKALVRLFDKLANGKMTEGINLSNKIIDLHQKRQGLLRKRKGPISGTKGLDRFRSEEAFYSNPLPDCICQTPTPTANASHVVR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3106 525 PIRSF UCP009360 4 515 IPR024709 -
Amo17g3106 525 Pfam GDP-fucose protein O-fucosyltransferase 117 432 IPR019378 -
Amo17g3106 525 PANTHER OS02G0726500 PROTEIN-RELATED 49 523 - -
Amo17g3106 525 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 49 523 - -
Amo17g3106 525 CDD O-FucT_plant 117 438 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3106 Amo-Chr17 135079709 135083729 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3106 61 512 Miscellaneous Gene Families AT1G22460 67.257 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3106 - - adu:107460899 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3106 17 135079709 135083729 Amo17g3106 17 135079709 135083729 ECH
Amo17g3106 17 135079709 135083729 Amo17g3113 17 135160552 135164497 PCT
Amo17g3113 17 135160552 135164497 Amo17g3106 17 135079709 135083729 PCT