Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3026 ATGTTGCAAAGGGCAGCAACAAATGCATATACATGGTGGTGGGCCAGCCATGTCAGGACAAAACAATCCAAATGGCTGGAACAAAGCCTCCAAGATGTGGAGGACAAGGCTGCAGAGGCTCTCCAAATCATTGATCATACCGGGGACTCGTTTGCGCAAAGGGCGGAAATGTACTACAAGAAGAAGCCAGAATTGATAAATTTTGTGGAAGAAACCTTAAAAGCATATAGATCATTGGCACAGAGATTTGATCATATTTCAAAGGAGCTCCAAACAGCGAATCGCCAACTTGCCACAGCGTTTCCAGAACAAGTCCAGTATAGAATGGATGATGATGATGAATTTGATGTGACTTTTCCTGCAAGCAATGCATCTTCACAGGAAACACACAATCAAACACAAAAATCAGACATTTCTAAGGCTGCAAGTGTGAGAAAGCAGAACTTGAGGAGCTATTCCATGTTGCTGTCTAGAAAGGGACCATCTAGGAAGATTGCTGGCTTTGAAAAATATGCCCCAACAATACCAATTTGTGGTTTCAGTAAGGCGGAGGCGCATGCTCAAGTTGACAAGCTTCAAAAGGAAATTTTAGCTCTTCAGACTGAGAAAGAGTTTGTGAGGAGTTTGTATGAAGGTTCCTATGATAAGTACTGGGAAATTGAAGACCGGATCGTAGGAATACAGAAAATAGTTGGTGACTTGCAAGATGAGTTTGGAATTTCTACTGTCATAGAAGATAATGATGCACGAACTTTGATGGCAACCACGGCTCTGGATTCATGCAAAGTGAAATTGACTAAATTGCAAGAAGAACAATTGCAATCTTCTGAAGAAGCTAATGCAGCATTCCAAAAGGTTAAGGAATCTCATGAAAGGATTGAAACACTTAAGGAAGAATTTCTTTCTAAACATTCAATTCAACTAGACCAAGGCACCGAAACAGATCTGAGTAGCATAGACATAGAGGAAGAGTTGGCTGCCTTGGAAGATGAGCCACACGAGGACGCAGAGCTTCTGAAAGAAAACATGGAAAATCTTGAAGAAGATTCAGATATGTCCCACACTATGACAGAAATCGTAGAGTTGATTGATAAGCTTGTTAATAAGGTTGTTTTCTTGGAAACTGCAGTCTCTTCTCAGAATGTTTCGGTAAAAAGGCTAATGTCAGAAGCAGAAAAACTTGAGACAAATATAAAAAGCTTGGAAGAGGACAAGGAAATGCTGTTAGATGATTCAGAAAAAACCAAGAAGCTGCTGAAGGAATTGGAGGAGGAAATGAAGAGAGTTAAGCTTCTTAACAGGAATGTCAGAATGCAAGAAAATAGTATCCAATCAAACTTCACTGAAGCTAGCAATAATCTTGAGAATCTTTCAGAAAAATTGAAGGATGTGAAGCCAGAGGAACACTATACACCTTACAAGAAGAGAAGTGGCGATAACTTAGCTATTATGAAAGATGTTGAGACAACAAAGGAAGAAAAGGAAGATTATGCCACAGATCTAAGCAATATGACAGGGGAAGTTAACAAAAAGGAAGATTATGCCACAGACCTAAGCGATTCGACATGTGAAGATAACAAGTCCAAGTCAGAAGAAAATACTGATCCTATTACTGAAAGCATTCCTGAAGTAATAGAGAAGGAAAAGGATGATTTGCCTCAGACAGTTGATAGTGTGGATATCAAGACGCCAGAATCGGTTGCTGGTGAGGAAGAAGATCAGCCTAACATGAGGCAGATGTTTGTCAGTGGACTGGATGACAGAGAAAAGATTCTGTTGGAGGAATACACATCAGTTCTAAAGGACTACAAGCTTGTCAAGGTCAAGCTCCATGAGATGGAGAAGAAAAATTCTGAGAGCATTAACGAGCTGGAACTTCAGTTAAATGAGTTCAAGAAGGAAGCCAGCATGCAGGAACAAGATGAAATTCCATCTTCAGCTATGGAGGAAAGTGCTAGAAGCTCTTCTGCAGATCAACCTGAAATTCCATCTCAAGGAATGGAGGAGGAAAGTGCTAGAAGCTCTTTTGCAGATCAACCCCAAGACGCCGAAAACAAAGAAGATTTGTCAACTAGCATGTCTCCAACAACAGAATCCATATTACAACAGATTGTGACAGTAAACCATATTGAAGATCACCATAGTCCCCTTTCAGCCATGGAAAAGAAATTCCGTTCCTACATCGATGATTTAATGGAGGAGAACCTAGAGTTCTGGTTGAGATTCAGCACAGCAGTTCACCAGATTCAGAGGTTCCAAAATTGCATGCAAGATCTAAAACTTGAAGTAAGGAACATAAAGTTTAAGAAAAGGACTGAAGGGGACTTACCAAATTCCAATATCCAATCCGAAATAAAGCCAATATATAGACACCTAAGGGAGATAAGAACTGAATTGTCATTGTGGCTTGAACACAATGCAGTGCTGCAGGAGGAGTTGCAAACTAGGCATCCAACACTGATAAGCTTACAAGACGAAATCGCGAGAGCGGCCAACCCGGTTTCCACGACAGAAAGAGCACAACTTAGTGAGTACCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCCACATGAAGCAAGAGAGCAACAGGATTTTGAGTGAGCTTCAAGGAGGACTCAGTTTTGTTAAGGGGCTGAAAGTTGAAGTGGAGAAGTCTCTAGAAGAAATGGGCCAAGAACTTGGGGTGAACAAGCCTGGCCAAGTTCCTGGACATGTTCACATGAAGCAGAATCAACCAAGTAGCCGTACTAGAATACCATTAAGGTCATTTTTGTTTGGAGTGAAGTTGAAGAAGCATGGCCAATCTTCCTCCTCCTCACGTGTAAATGCAGCAATGCAGAAACCAAATCTTGATCCATCAGCTACTCATGATGCCACATTGTAG 2883 0.4114 MLQRAATNAYTWWWASHVRTKQSKWLEQSLQDVEDKAAEALQIIDHTGDSFAQRAEMYYKKKPELINFVEETLKAYRSLAQRFDHISKELQTANRQLATAFPEQVQYRMDDDDEFDVTFPASNASSQETHNQTQKSDISKAASVRKQNLRSYSMLLSRKGPSRKIAGFEKYAPTIPICGFSKAEAHAQVDKLQKEILALQTEKEFVRSLYEGSYDKYWEIEDRIVGIQKIVGDLQDEFGISTVIEDNDARTLMATTALDSCKVKLTKLQEEQLQSSEEANAAFQKVKESHERIETLKEEFLSKHSIQLDQGTETDLSSIDIEEELAALEDEPHEDAELLKENMENLEEDSDMSHTMTEIVELIDKLVNKVVFLETAVSSQNVSVKRLMSEAEKLETNIKSLEEDKEMLLDDSEKTKKLLKELEEEMKRVKLLNRNVRMQENSIQSNFTEASNNLENLSEKLKDVKPEEHYTPYKKRSGDNLAIMKDVETTKEEKEDYATDLSNMTGEVNKKEDYATDLSDSTCEDNKSKSEENTDPITESIPEVIEKEKDDLPQTVDSVDIKTPESVAGEEEDQPNMRQMFVSGLDDREKILLEEYTSVLKDYKLVKVKLHEMEKKNSESINELELQLNEFKKEASMQEQDEIPSSAMEESARSSSADQPEIPSQGMEEESARSSFADQPQDAENKEDLSTSMSPTTESILQQIVTVNHIEDHHSPLSAMEKKFRSYIDDLMEENLEFWLRFSTAVHQIQRFQNCMQDLKLEVRNIKFKKRTEGDLPNSNIQSEIKPIYRHLREIRTELSLWLEHNAVLQEELQTRHPTLISLQDEIARAANPVSTTERAQLSEYQAAKFQGEVLHMKQESNRILSELQGGLSFVKGLKVEVEKSLEEMGQELGVNKPGQVPGHVHMKQNQPSSRTRIPLRSFLFGVKLKKHGQSSSSSRVNAAMQKPNLDPSATHDATL* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3026 960 Coils Coil 610 641 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 640 679 - -
Amo17g3026 960 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Amo17g3026 960 PANTHER PROTEIN NETWORKED 2D 1 947 - -
Amo17g3026 960 PANTHER PROTEIN NETWORKED 2A 1 947 - -
Amo17g3026 960 Coils Coil 182 209 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 894 914 - -
Amo17g3026 960 Coils Coil 76 96 - -
Amo17g3026 960 Coils Coil 279 299 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 934 960 - -
Amo17g3026 960 Pfam KIP1-like protein 12 84 IPR011684 GO:0003779
Amo17g3026 960 MobiDBLite consensus disorder prediction 508 573 - -
Amo17g3026 960 Coils Coil 384 460 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 121 144 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 508 556 - -
Amo17g3026 960 MobiDBLite consensus disorder prediction 634 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3026 Amo-Chr17 133339839 133343273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3026 - - ahf:112763975 1694.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3026 17 133339839 133343273 Amo17g3026 17 133339839 133343273 ECH
Amo17g3026 17 133339839 133343273 Amo07g1850 07 55417565 55422020 hybridization
Amo17g3026 17 133339839 133343273 Amo17g3026 17 133339839 133343273 PCT
Amo07g1850 07 55417565 55422020 Amo17g3026 17 133339839 133343273 PCT