Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1850 ATGTTGCAAAGGGCAGCAAGCAATGCATATTCGTGGTGGTGGGCTAGCCACATAAGGACAAAACAGTCAAAATGGCTGGATCAAAGCCTCCAAGATATGGAGGAGAGGGTATTTGATACCCTCAGAACCCTGCAAGATGAAGGGGACTCGTTTGCGACGAGGGCAGAAATGTATTACAAGAAGCGGCCGGAGCTGGTGAGTTTTGTAGAAGAAAGCTTCCGATCATACAGAGCCTTAGCAGAGCGGTATGATAAACTTTCAAAGGACCTTCAAAGCGCGAACCGCACTATTGCAAGTGTGTTCCCAGATCAAGTTCATTATAGGACTGAAGAAGAAGACGAAGACGATGATGAAGAAGAAGAAGAGAAAGGATCAAATGATGCATTATCACCAAAATCTAACAATGGAAGAAGCACTAATAATAATAATAATAACAATGAAGCATTGATACCTAAAGTTCCAAATATCCCAAAGAAGGGTTGTTTCAGAAGTCCATCCATGTTGCTCTCAAGAAAAGGATCACTGCCAAAGAGGACTACAAGCCCTTCCGAAAAAGATTTCAAAGTTTCAGGTTCCGGTCTGTCGAAGGAACAAGCACTCGGTGAAATTGACAAGCTTCAGAAAGATATTTTGACACTTCAGACTGAGAAAGAGTTTGTTAGGAGTTTGTATGAGCGCGCCTATACACAGTATTGGGAAATCGAGGATCGGATCACAGCAATGCAGAAAAGCGTCAGCAAATTGCAAGATGAGTATGGTGTTGGAACCGTCATCGAAGACAACGAAGCTCGAACTTTAATGGCGGCCACTGCTCTAAAGTCTTGTCAAGTTACTTTAGCTAAGTTGCAGGAGATTCAAGCACAATCATCCGAAGAGGCTAGAGTTGAGTTTGAAAGAGTTAAGGAAGCTCATGAGATGTTTGAGTCTCTTAGAGACCAATTCATCTCTAAATATATGAACCAAGATGAATCCAAGATTGTAACACCAGTAAGTCCAGTAGAAGAAGAAAATGACATGGATGATGCTGAGATTCAAGCGAAGGTTAAGGAAACTAAATTGGAGGAAGATTCAAGTGAAGTCATCACTGTGACTGAAATGGCCGATAAGATTAATCAGCTTGTCAGTAAGGTTGTTACATTGGAAACCACCGTTTCGTCTCAAACAGGTTTGGTGCAGAGATTGAGATCAGAAACAGATGAACTTCAGACAAATATAAAGAAATTGGAAGAGGAGAAGGATGTTTTGATAGAAGGTTCGGAAGTTACGAACCAAAAGCTGAAAGAAGTGGAGGAAGAGTTGAGGAGGGTAAAGCTTTTGAACCGAAGCGTCCGAAGCCAAGACAATACAATCAAAGCACACTTCATTGAGGCTAGTTATGACATTAAACACCTTTCTGAAAAACTGAATAACATGAAGCCAGATGTGGAGGAAGAAAATATGGTACTGTACAAGAAGGAGAACAATAATGATCTTGATGGTAAACAAGGAAATGAATCCCAAATTTTCGACGAGAATGTCAAGACATTAAAAGAAGAAGATGGCGGAGATGTGACTCCGGAAAGGATTCAGAATATGGGCGGTGATGGTGGTGAAATTGAATCACATGATTTGCAGAGTGTTGATGGTAAGGGAGATGAACCTGACTGGAGGCAATTGTATATAAGTGGATTAGATGATAGAGAAAAGATTCTGCTGGAGGAGTATACTTCTGTTTTAAGGGACTATAAGGATGTAAAGATTAAGCTTAATGATGTGGAGAAGAAAAACCGGGATAGCATTTTTGAATTGGCACTTCAGCTAAGGGAATTGAAGAATGCATTAGCCAACAAGGACCAAGAGATAATCTATTTACATCACAAGCTTAACAGTCCAAATTCAGCTGGTGATAATTCTGATGTAAGTCCATTCACCATGGCAACAGAGTACAAATACACACCGAACGAAGCTCTTCTTCGAGAAGCCGAAGCKCAAGAAGCTAACTTGCCGACGGTCCTTGAAAAGAATTCGCCATTAATTACTTCAGATGCGAATCCAATCAAAAGTCCTTCTTCAGATGATTCGTCACATCTGAAAATGAATGAGGGAAGGCTGGAAGGGCTATCAAGCATAGAGAAGAAATTCCGGTCTGACATGGATGACATTCTAGAGAAGAGTCTTGAATTCTGGCTCCGATTTGGCACTTCTATTAACCAGATTCAAAAGTACCAGAATTCAATCCAGGACTTAAAAGCCGACCTRTGCCACATACAAGAAAGTCATACAAGATCGTCCTCGGAAGGACATTCTTCTAAAAGAACGCATTTACAGTCACAACTTAAGCCGATATTCAAACACCTGCGGGAGATAAGAACRGAGTTATCGCTGTGGCTCGAACACAACACGGTGTTGCAGGTTGAGATGCAGGATAGGAACTCTTCCTTGTGCCACTTGCATGATGAAATAATTAGAGCAAGCAACAATAATGGAGAAGAAGAGAAWGAGGGAGAGCTAACGATAAGTCCTTATCAGGCTGYTAAGTTTCAAGGTGAGATTATGAACTTGAAACAACAGAACAACACTGTTGCAAGTGAGCTTCAAGCAGGTCTAAGCCTTGTGAGTGGGATGAAGAATGATGTTGAGAAAACACTTGATGAACTTGACCTTGTTATTGCCCCCAATAAGAAAAGCAGTAGCCATGGAAGCTCCAAAAATGATTCGGGGCGACCTCGAGTACCATTGAAGTCTTTGTTGTTTGGAGCCAAGTTGAAGAAGCATAAGCAAAAGCAATCGCTATTTTCATGTGTAAATCCCACCGTGCATAAGAGTGACATGGAAGATGAGGCTGGATCTCCAATACATACACAGCAACAATGA 2853 0.4125 MLQRAASNAYSWWWASHIRTKQSKWLDQSLQDMEERVFDTLRTLQDEGDSFATRAEMYYKKRPELVSFVEESFRSYRALAERYDKLSKDLQSANRTIASVFPDQVHYRTEEEDEDDDEEEEEKGSNDALSPKSNNGRSTNNNNNNNEALIPKVPNIPKKGCFRSPSMLLSRKGSLPKRTTSPSEKDFKVSGSGLSKEQALGEIDKLQKDILTLQTEKEFVRSLYERAYTQYWEIEDRITAMQKSVSKLQDEYGVGTVIEDNEARTLMAATALKSCQVTLAKLQEIQAQSSEEARVEFERVKEAHEMFESLRDQFISKYMNQDESKIVTPVSPVEEENDMDDAEIQAKVKETKLEEDSSEVITVTEMADKINQLVSKVVTLETTVSSQTGLVQRLRSETDELQTNIKKLEEEKDVLIEGSEVTNQKLKEVEEELRRVKLLNRSVRSQDNTIKAHFIEASYDIKHLSEKLNNMKPDVEEENMVLYKKENNNDLDGKQGNESQIFDENVKTLKEEDGGDVTPERIQNMGGDGGEIESHDLQSVDGKGDEPDWRQLYISGLDDREKILLEEYTSVLRDYKDVKIKLNDVEKKNRDSIFELALQLRELKNALANKDQEIIYLHHKLNSPNSAGDNSDVSPFTMATEYKYTPNEALLREAEAQEANLPTVLEKNSPLITSDANPIKSPSSDDSSHLKMNEGRLEGLSSIEKKFRSDMDDILEKSLEFWLRFGTSINQIQKYQNSIQDLKADLCHIQESHTRSSSEGHSSKRTHLQSQLKPIFKHLREIRTELSLWLEHNTVLQVEMQDRNSSLCHLHDEIIRASNNNGEEEXEGELTISPYQAXKFQGEIMNLKQQNNTVASELQAGLSLVSGMKNDVEKTLDELDLVIAPNKKSSSHGSSKNDSGRPRVPLKSLLFGAKLKKHKQKQSLFSCVNPTVHKSDMEDEAGSPIHTQQQ* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1850 950 MobiDBLite consensus disorder prediction 926 950 - -
Amo07g1850 950 Coils Coil 339 359 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 512 544 - -
Amo07g1850 950 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Amo07g1850 950 PANTHER PROTEIN NETWORKED 2A 1 935 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 671 692 - -
Amo07g1850 950 Coils Coil 76 96 - -
Amo07g1850 950 PANTHER PROTEIN NETWORKED 2D 1 935 - -
Amo07g1850 950 Coils Coil 391 446 - -
Amo07g1850 950 Coils Coil 593 613 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 109 124 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 128 150 - -
Amo07g1850 950 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Amo07g1850 950 Coils Coil 196 216 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 101 190 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 671 686 - -
Amo07g1850 950 MobiDBLite consensus disorder prediction 886 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1850 Amo-Chr7 55417565 55422020 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1850 - - mtr:MTR_5g066340 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3026 17 133339839 133343273 Amo07g1850 07 55417565 55422020 hybridization
Amo07g1850 07 55417565 55422020 Amo17g3026 17 133339839 133343273 PCT