Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3016 ATGGGTTCACTGGGCAACCTCGAAGCACCACCGCTCCTGACTTCAAGAATCTCAACGGTGGTTCCCGCCACCCCGCGAGGTGACGAAAACGGTGCGTATCAGCTCAGCTACATGGACCTCCTCATGAAGCTCCACTACATCCGACCCGTATTCTTCTTCGCTTCTGAGTCCGTACAAGGCCTCACCATCTCGGACCTCAAGACGCCAATGTTCCCACTTCTTGACACGTGTTCACATGTTTCGGGTCGGATTCGAAGATCCGAATCTGGAAGGCCGTTCGTGAAGTGCAACGACGCCGGTGTGCGTATCGCTGAGTCGCACCGTGACGTCACGCTCAGGGAGTGGTTCGATGAGAATAATGGGTGCTTGCGCGAGGTTGATGATGGGCTCGTCCATGACCACGTGCTTGGCCCTGACCTTGGTTTCTCCCCTCTGGTTTTCGTTAAGTTCACGTGGTTCAAATGTGGAGGACTCTCCGTGGGCCTGAGCTGGGCTCACGTGCTTGGCGATGCATTTTCAGCTTTGGACTTCATAACCAAGTGGAGTAACATCCTTGCCGGTCACGTGCCAGTGCCACCAAAATCTCTTCGGATCCCAAATAATCTCATTGCGCCTGACGAAGAAATAATCATTCAACCAAATAATAATTCCCTCCTTGTTTCTGAGAATCCTGCTTCCATCAAAAGGGCCACAATTGTTGGGGAATACTGGCTTGCTTCCAATCGCTAA 729 0.524 MGSLGNLEAPPLLTSRISTVVPATPRGDENGAYQLSYMDLLMKLHYIRPVFFFASESVQGLTISDLKTPMFPLLDTCSHVSGRIRRSESGRPFVKCNDAGVRIAESHRDVTLREWFDENNGCLREVDDGLVHDHVLGPDLGFSPLVFVKFTWFKCGGLSVGLSWAHVLGDAFSALDFITKWSNILAGHVPVPPKSLRIPNNLIAPDEEIIIQPNNNSLLVSENPASIKRATIVGEYWLASNR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3016 242 Pfam Transferase family 18 191 - -
Amo17g3016 242 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 241 - -
Amo17g3016 242 PANTHER PROTEIN ECERIFERUM 2 11 241 - -
Amo17g3016 242 Gene3D - 14 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3016 Amo-Chr17 133243857 133248076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3016 7 242 Acyl Lipid Metabolism Gene Families AT4G24510 41.532 1.50e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3016 - - ahf:112767442 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3016 17 133243857 133248076 Amo17g3016 17 133243857 133248076 ECH
Amo17g3016 17 133243857 133248076 Amo07g1852 07 55456604 55461444 hybridization