Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1852 ATGGGTTCTTTAACTACCAACATGGGAGAAGAAAGCCAACCATCTCTAACCTCCAAGATCTCAACGGTGGTGCCAGCCACGCCACGTGGCAACGAGCGCGGCAMGTACAACCTWGGCTACATGGACCTCCTCATGAAGCTTCACTACGTAAGAACCGTTCATTTCTTTAGCCCTCAAGCWGCACAAGGGCTCTCAATCTTTGACTTGAAGAAACCTATGTTTCCCCTGTTGGATCCGTATTCACACATMTCGGGCCGGATCCGGAGGTCCGAATCGTCCGGGCGACCGTTCATCAAGTGCAACGATGCTGGTGTCCGCATAGTTGAGTCTCATTGTGATAAGACACTTGAGGAATGGTTCAACCAAAAAGGGTACTCCATTCATGAACTTGTCCATGATCACGTGCTTGGTCCTGACCTTGCTTTCTCACCCTTGCTCTTCCTCAAGTTTACTTGGTTCAAATGTGGAGGGCTGTGTGTGGGACTGAGTTGGTCTCATGTCCTTGGAGACGCTTTCTCGGCTTTCAATTTCATCACCAAGTGGAGTCACGCGCTCGCCGGTCACGTGCCACCAAAATCCCTTCACGTAAACCCTAATTATGAAGAGTTACAATCTCTTCCTATTAATTCCATTCAAGATTCACAGATTCCCATCGTGAAAAGGGCCACAATTCTTGACGAAGAACGCTGGATCGCCGCAACTGACACCAAAATCGTTACTCACACTTTCTATGTCAGTTACAACCAACTTCAAGATTCGGTTACAAGTAGCCAAGAATCTAACAACACCTGTTGTTTCGAAATCGTTTCGGCATTAKTATGGAAGTGTTTGGCTCAGATCAGGAGCTATTCAGAGCCAAAGGATGTTGTAATTTGCGAATATCATAGTGAAAACTACGAGTTCCCTACAAATATTGGCTTGGAATTTAGTACAGTTGAAGCTAGTAGCAAAGTTTCTGTTTCGGAATCTGATGTTTTGGAATTGGCAACGCTCATTGGCAGTGAGAAAAAGAAGGTTGAGAAGCATGTCATGGAGAAATTGGTGGAAGAAAGTGAAGGGAGAGAGGATTTTATAGTGTATGGAACGAGGTTGACTTTTGTGAACTTGGAAGAAGAAGGTAACGTTATTTATGGGGTGAAGCTTATAAATGGAGAGAAACCAATGGTTGCGAATTGTGCCCTTCATGGGGTGGGTGATGAAGGGGTAGTTTTGGTACTTCCAGCACCTCAGGATAAGGAAGATGGTGGCAAAATTGGAAGGTTGGTCACAGTTTCTCTGCCAGAAAAAGAAGTTGAACAACTTAAAGATAAATTGGGAAGTGAATGGGCTATCCCATCACACCCTTGA 1347 0.4499 MGSLTTNMGEESQPSLTSKISTVVPATPRGNERGXYNLGYMDLLMKLHYVRTVHFFSPQAAQGLSIFDLKKPMFPLLDPYSHISGRIRRSESSGRPFIKCNDAGVRIVESHCDKTLEEWFNQKGYSIHELVHDHVLGPDLAFSPLLFLKFTWFKCGGLCVGLSWSHVLGDAFSAFNFITKWSHALAGHVPPKSLHVNPNYEELQSLPINSIQDSQIPIVKRATILDEERWIAATDTKIVTHTFYVSYNQLQDSVTSSQESNNTCCFEIVSALXWKCLAQIRSYSEPKDVVICEYHSENYEFPTNIGLEFSTVEASSKVSVSESDVLELATLIGSEKKKVEKHVMEKLVEESEGREDFIVYGTRLTFVNLEEEGNVIYGVKLINGEKPMVANCALHGVGDEGVVLVLPAPQDKEDGGKIGRLVTVSLPEKEVEQLKDKLGSEWAIPSHP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1852 448 Gene3D - 17 207 IPR023213 -
Amo07g1852 448 MobiDBLite consensus disorder prediction 1 25 - -
Amo07g1852 448 Pfam Transferase family 21 287 - -
Amo07g1852 448 PANTHER PROTEIN ECERIFERUM 2 15 442 - -
Amo07g1852 448 Gene3D - 233 437 IPR023213 -
Amo07g1852 448 MobiDBLite consensus disorder prediction 1 28 - -
Amo07g1852 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1852 Amo-Chr7 55456604 55461444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1852 11 438 Acyl Lipid Metabolism Gene Families AT4G24510 38.688 1.21e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1852 - - gmx:100814097 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3016 17 133243857 133248076 Amo07g1852 07 55456604 55461444 hybridization