Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2936 ATGGAAGGTGGAGAGAACATTCTAGATATCATTCATAATGATTATGATGATGGTGATGATGTTGAAATGGTTGATGTTGAAGAAGGAGAGTTGGTGGAACCTGATTCCCGGAATTCTTTGGGACAAAGTGAAGCTGGAGGTACCAATGAAGCAAATGAAGACTCTCATAACAAGGACCACAGGCTTAGAGCTAAAAAGAAAAGGAATAAGAGAAAGAAGAAAGCTTCAGGGTCCAACAAGGCAATTGATATAAACAGATTTGTGATAGATGTGTGTCGCCGTTTGAAAGAGAAAAAACAATATATGGTATACACTGCTGTAGGTTGCCTTGGGATTTCTGCACTAAGCGATCTCGTCAAAGAGGTTGATGCAATTCAGGCTTGTGGGGGCCAAAAAACAGCTGATGGCAGTCGATTCCGGACAGGGGGTGGCATACTGTGGAACATCATTAAAGTTCGAGAACCAAAGGTGTACAAAGAGATAATGAAAAAAGTAAAGGAATTCGAGAAGCAATTCAGGCAGCCATACGTTAAGCAACCACCTGTGCCAAAGAAGATAGATCCTTCGGAAGGGATCAACCTTCCGTTTGCTGACAGAGATGAGGGAAATGTTTTAGGCAGTGCCTTCCCTGCTTCCCAAATGCAAGATCAACATGAACCAGCAGCAACTTCTGAAGCGAAACCTATCCCTGTTATTCATGATAGGTTAAGGACCCCTGTTTCGTATGATGATGATCTGCTTGGAGAGGATCCAGAAAAAGATGCAACCTGA 771 0.4267 MEGGENILDIIHNDYDDGDDVEMVDVEEGELVEPDSRNSLGQSEAGGTNEANEDSHNKDHRLRAKKKRNKRKKKASGSNKAIDINRFVIDVCRRLKEKKQYMVYTAVGCLGISALSDLVKEVDAIQACGGQKTADGSRFRTGGGILWNIIKVREPKVYKEIMKKVKEFEKQFRQPYVKQPPVPKKIDPSEGINLPFADRDEGNVLGSAFPASQMQDQHEPAATSEAKPIPVIHDRLRTPVSYDDDLLGEDPEKDAT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2936 256 MobiDBLite consensus disorder prediction 1 20 - -
Amo17g2936 256 MobiDBLite consensus disorder prediction 204 256 - -
Amo17g2936 256 MobiDBLite consensus disorder prediction 61 75 - -
Amo17g2936 256 Gene3D - 79 175 IPR038092 -
Amo17g2936 256 MobiDBLite consensus disorder prediction 36 50 - -
Amo17g2936 256 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 88 166 IPR019385 -
Amo17g2936 256 MobiDBLite consensus disorder prediction 237 256 - -
Amo17g2936 256 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 247 IPR039047 GO:0006408
Amo17g2936 256 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2936 Amo-Chr17 131562684 131565760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2936 K14291 - gmx:100805103 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0894 08 15271845 15275052 Amo17g2936 17 131562684 131565760 hybridization
Amo16g4086 16 153322810 153326488 Amo17g2936 17 131562684 131565760 PCT
Amo17g2936 17 131562684 131565760 Amo16g4086 16 153322810 153326488 PCT