Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0894 ATGGAAGGTGGAGATAACATTCTAGATATCATTCACAATGATTATGATGATGGTGATGATGTTGAAATGGTTGATGTTGAAGAAGGAGAGTTGGTGGAACCTGATTCCCGGAATTCTTTGCGACAAAGTGAAGCTGGAGGTACCAATGAAGCAAATGAAGACTCTCATAATAAAGACCACAGGCTTAGAGCTAAAAAGAAAAGGAATAAGAGAAAGAAGAAAGCTTCAGGGTCCAACAAGGCAATTGATATAAACAGATTTGTGATAGATGTGTGTCGCCATTTGAAAGAGAAAAAACAATATATGGTATACACTGCTGTAGGTTGCCTTGGGGTTTCTGCACTAAGCGATCTCGTCAAAGAGGTTGATGCAATTCAGGCTTGTGGGGGCCAAAAAACAGCTGATGGCAGTCGATTCCGGACAGGGGGTGGCATACTGTGGAACATCATTAAAGTTCGAGAACCAAAGGTGTACAAAGAGATAATGAAAAAAGTAAAGGAATTCGAGAAGCAATTCAGGCAGCCATACGTTAAGCAACCACCTGTGCCAAAGAAGATAGATCCTCCGGAAGGGATCAACCTTCCGATTGCTGACAGAGATGAGGGAAATGTTTTAGGCAGTGCCTTTCCTGCTTCCCAAATGCAAGATCAACATAAACCAGCAGCAACTTCTGAAGTGAAACCTATCCCTATTATTCATGATAGGTTAAGGACCCCTGTTTCGTATGATGATGATCTGCTTGGAGAGGATCCAGAAAAAGATGCAACCTGA 771 0.4202 MEGGDNILDIIHNDYDDGDDVEMVDVEEGELVEPDSRNSLRQSEAGGTNEANEDSHNKDHRLRAKKKRNKRKKKASGSNKAIDINRFVIDVCRHLKEKKQYMVYTAVGCLGVSALSDLVKEVDAIQACGGQKTADGSRFRTGGGILWNIIKVREPKVYKEIMKKVKEFEKQFRQPYVKQPPVPKKIDPPEGINLPIADRDEGNVLGSAFPASQMQDQHKPAATSEVKPIPIIHDRLRTPVSYDDDLLGEDPEKDAT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0894 256 MobiDBLite consensus disorder prediction 204 256 - -
Amo08g0894 256 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 88 166 IPR019385 -
Amo08g0894 256 MobiDBLite consensus disorder prediction 61 75 - -
Amo08g0894 256 MobiDBLite consensus disorder prediction 28 78 - -
Amo08g0894 256 Gene3D - 79 175 IPR038092 -
Amo08g0894 256 MobiDBLite consensus disorder prediction 237 256 - -
Amo08g0894 256 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 247 IPR039047 GO:0006408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0894 Amo-Chr8 15271845 15275052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0894 K14291 - gmx:100805103 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0894 08 15271845 15275052 Amo17g2936 17 131562684 131565760 hybridization
Amo16g4086 16 153322810 153326488 Amo08g0894 08 15271845 15275052 PCT
Amo08g0894 08 15271845 15275052 Amo16g4086 16 153322810 153326488 PCT