Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2904 ATGTGGGAATCTATTGTTTTGACGGTGGTTGCCACCGCCGGCAACAACGTCGGCAAGATCCTTCAGAAGAAGGGCACACTCATTCTCCCCCCTCTCTCTTTCAAGCTCAAGGTCATAAAGGCATATGCTTCAAACAAAACCTGGTTGATAGGTTTTCTTATGGACATAATTGGGGCACTGTTGATGTTAAGGGCACTTTCTCTAGCTCCTGTCTCTGTTATCCAACCAGTTTCTGGCAGTGGACTGGCCATTCTTTCGATCTTTTCGCATTTTTATCTTAAGGAAGTCATGAATGTTGTTGATTGGGTTGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGAGGCTTCTGCTCTATCCATTTTACATATACCGTGGCTGGCATTTGTCGTTTTCATCTTGTTTATACTACTTAGTGCATGGCTTCGTATATGCAAACGTCATCGCAGAGAACAAGAGATGATGGAATATGATGTTGTTGAGGAAATCATATATGGCTTGGAATCTGGAATTCTGTTCGGGATGGCTTCTGTAATTTCGAAGATGGGATTTTTATTCCTGGAGCAAGGTTTCCCCAGCCTGTTGGTTCCTATGTGCATCATCATCAGTGTATTCTTTAGTGGTGCAGGCTTATTCTACCAGACACGCGGCCTAAAGCATGGGAGGGCTATTATAGTTTCTACATGTGCAGCTGTGGCATCAATTTTGACTGGTGTACTTGCTGGGATGCTTGCTTTAGGCGAGCGACTCCCTTCGGCCCCAAAAGCTCGTTTCGCACTTCTTCTTGGATGGCTGCTTATCATTGTTGGCGTGGTTTTACTCGTGGGTTCAAAAAGGCTGGTGAGATTTCTTAGAGTTCCTTCGCGCCGCTTTAAGAATTATGGCACTCGAAGAGCCGGGACATCCCGTATCAAGGAACCAAGCCCAACTGCTGTCGTTCAAGCAGCAACCTTGAATCATTTACTATCATCAGCTTCAAAAGAAAAAGCTTGA 1017 0.4533 MWESIVLTVVATAGNNVGKILQKKGTLILPPLSFKLKVIKAYASNKTWLIGFLMDIIGALLMLRALSLAPVSVIQPVSGSGLAILSIFSHFYLKEVMNVVDWVGITLAGFGTIGVGAGGEEQEASALSILHIPWLAFVVFILFILLSAWLRICKRHRREQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPSLLVPMCIIISVFFSGAGLFYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGERLPSAPKARFALLLGWLLIIVGVVLLVGSKRLVRFLRVPSRRFKNYGTRRAGTSRIKEPSPTAVVQAATLNHLLSSASKEKA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2904 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 286 - -
Amo17g2904 338 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 335 - -
Amo17g2904 338 Pfam Magnesium transporter NIPA 20 286 IPR008521 GO:0015095|GO:0015693|GO:0016021
Amo17g2904 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Amo17g2904 338 PANTHER UNCHARACTERIZED 1 335 IPR008521 GO:0015095|GO:0015693|GO:0016021
Amo17g2904 338 Gene3D - 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2904 Amo-Chr17 131218828 131221745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2904 - - gmx:100788141 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0909 08 15717407 15720326 Amo17g2904 17 131218828 131221745 hybridization
Amo16g4013 16 152304348 152308407 Amo17g2904 17 131218828 131221745 PCT
Amo17g2904 17 131218828 131221745 Amo16g4013 16 152304348 152308407 PCT