Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4013 ATGTGGGAATCCATTGTGTTAACGGTGGCTGCCACCGCCGGAAACAACATCGGAAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTGAAGCTCAAGGTGATAAGGGCTTATGCATTTAACAAAATCTGGGTTATAGGTTTTCTAATGGATATAGGTGGTGCATTATTGATGTTAAGAGCATTATCTTTGGCCCCGGTATCTGTGATCCAACCGGTTTCGGGAGTCGGACTAGCAATTCTTTCAATCTTCTCTCATTTTTATCTGAAGGAAATCATGAATGCTGTTGATTGGGTTGGCATTGCCTTGGCAGGTGTTGGCACAATAGGAGTTGGTGCCGGAGGTGAAGAGCAAGAGGCGGCTACTCTGTCCATTTTTCACATACCATGTCTGGCATTTGTTGTTGCCATCTTGTTTGTATTGCTTAATGGAGGGCTTAGAATATGCAGGCGTCATCGAAGAGAACAAGAGATGATGGAATACGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGTCTTCGGTAATTTCAAAGATGGGATTTCTGTTCCTAGAGCAAGGTTTTCACCAACTGTTGGTTCCTCTGTGCATCATATTCAGTGTGTGTTGTAGTGGAACAGGGTTTTACTACCAGACACGGGGACTAAAGCACGGTAGGGCTATTGTGGTTTCTACATGTGCAGCCGTGGCATCAATTGTGAGCGGTGTACTAGCTGGAATGCTTGCATTGGGTGAAAGACTGCCTTCTGCCCCGAAAGCTCGCTTGGCACTTCTTCTTGGATGGCTACTTATAATCACGGGTGTAATTTTACTCGTTGGTTCGACGCGGCTAGTGAAATTCCTCTCGTGTTCTTCAGGACGCACGAAAAGAAGCAATGCTGATAAGAGTTACGGCGCTAGAAGACCAAGTTCTTTGCGTATAAGGGAACCGAATCCAAGCACCGTGATACCAGCCACGACGTTAAATCATCTGCTGCCATCGGCTTCCAAAGAAAAAGCTTGA 1035 0.4522 MWESIVLTVAATAGNNIGKILQKKGTVILPPLSLKLKVIRAYAFNKIWVIGFLMDIGGALLMLRALSLAPVSVIQPVSGVGLAILSIFSHFYLKEIMNAVDWVGIALAGVGTIGVGAGGEEQEAATLSIFHIPCLAFVVAILFVLLNGGLRICRRHRREQEMMEYDVVEEIIYGLESGILFGMSSVISKMGFLFLEQGFHQLLVPLCIIFSVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASIVSGVLAGMLALGERLPSAPKARLALLLGWLLIITGVILLVGSTRLVKFLSCSSGRTKRSNADKSYGARRPSSLRIREPNPSTVIPATTLNHLLPSASKEKA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4013 344 MobiDBLite consensus disorder prediction 298 322 - -
Amo16g4013 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Amo16g4013 344 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 341 - -
Amo16g4013 344 PANTHER UNCHARACTERIZED 1 341 IPR008521 GO:0015095|GO:0015693|GO:0016021
Amo16g4013 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 285 - -
Amo16g4013 344 Pfam Magnesium transporter NIPA 18 283 IPR008521 GO:0015095|GO:0015693|GO:0016021
Amo16g4013 344 Gene3D - 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4013 Amo-Chr16 152304348 152308407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4013 - - ahf:112697651 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4013 16 152304348 152308407 Amo08g0909 08 15717407 15720326 PCT
Amo16g4013 16 152304348 152308407 Amo17g2904 17 131218828 131221745 PCT
Amo08g0909 08 15717407 15720326 Amo16g4013 16 152304348 152308407 PCT
Amo17g2904 17 131218828 131221745 Amo16g4013 16 152304348 152308407 PCT