Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2866 ATGTCAAATCGATACGATCATGGCACGCAAGACATTAATACCAACAATAACAAACCTTCCGTCAGGAATCACAATAAATTCTTCCCCAAAACTCCCAATTCCAATCCAAACTCAGACCCAAACCCAAACCCTACCCTCTCATCCTCACTCAGAGGCAGAGGAGCCACACAACATATCCCAAACCCTACTGACCCTGCCGCTGGCAATTTCGTCCGCTACCTCCCTCAAGACGAGGCCGTCGCAGCTGGCCTTGGCGCCGACGATGGTGGATTGGACCCCGTAGAGTCCCAGAGAGTCGTTGATCTTCTCAATCGAGAGTTGTCTCGCTTACTCAAGTTGAAACCCAGGGAGTTCTGGAAGCAAGTGGCTAGTGATACTTCTRTGCATGAGTTTCTTGATAGCTTTCTGCAATTTAAGAGCAGATGGTATGATTTCCCTCATCGCGGGGCCAAAGGTATCGTCGCCGGAGTTATTGTTGGAGAGCTTGATTTGTGTCGACGGGTTTTCATGGTATTGTATCGAATTTCTTCTAATAAGGATCCTGGTGCTCGAGCTGCTGATGCCCTCACTTTGAGAGATCATCAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCAAAGTTGTTTGATATATGTGCRATATATGGTCATGAAAATGAAGAAATYACAAGATTGCTGGTCAGAAATGCTTTGAATGCTCAGCCTTGGATCCATAATGATCTGACCACAGTAATATCCCATTTTCTAGGGATTGTTAGCACAATGCATGAGCGTTGCAGCTCCTCATTGGAGGTGTTATTTTCTTCTGGAAATCCTGATCACCATAATGCTACTTTTCTTCAAGCTGATCTTTTGGAGGTGATGGATTTTTTGAATGATGCTATTGTATCGATGGATGCTTTTGTTTGTTCATACAAACCAGCAGTTATATTCTTCTCTTGCCCTATTGAAACAAGCTATGGAAATGAGGAACTGCTGAGCTTCCTTGCCAGATTGCATGATTCACTGATTCCATCCTTGCAAAAGGGATTCCATATCATTTTTGCTGATAGACAAGATGAAACAGTAGCTAATATAGTAGTAAGTTTGAAGATGTTAAGAATGAGATTATTGAAGTTTGGGTGGCAATTGTTGAGCTCTTGTTATCTAAGTGAAGAAGTGTTTGGAGATAGCAATCCTCTCCCAGCTGCCACAAAGATGTTTCCTGCCAATGTGGAGGACCCACTCATTAGAGCAGATATTCTGGTTCAAACATTTAGAGAAATCAATTCGGTATCATTACAGCTTCAGGAAAGCCATCAGAAGCAAACATTTCTTCAAGATCTTGAGAGGAGTTTCAATATATTAAGCAGAATGGAGAGATTAAAGGATAATGGATGGATACTCATCGATGACGAACAGCTTCAATATTTATCTGGGATTTTTGGTTCTCCAAAAGATATACTTAAGGAGCCAGATTCTACAAGAACCCCAGTGCCAAATCAAACATTGCAGATGGATGAAGATGCTGCAATTGTGGAGTCAAAAATAAGTCAAATTAGGGACCTCTTTCCTGATTATGGTAAAGGGTTTTTGACTGCATGTCTTGAGGTGTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTTCATGAAGATCTGAAACACTTGGACCCYACACTAGAGACGTTGCCAACAGGCAAGCCCACCACTGTGGGTGGGAAAGATAAAGGAAAAGGTAAACTAGTTGATTCTTCATCTACAGAAGTTGTCAGTGTCAAGCAACAGACAGGGGGGCAATTGATGTCATCCTCAGCTCCTGTAGGAAAATTTGTGAGGAAATCGAAGGATGATGAACCTGGTATTGGTATTCTGGATAAAAAGGATGACGAAAATACATCAAAAACTGCTGCTATGGTTTTGCAATATGAATATGACGATGAATATGATGACTCTTTTGATGACTTGGGTCTAAGTGTAGCGGACTCTGGAGTAGAGGAAAATGAGACACTGGCTGATCAAGTCAGTGCAAAATCGGGTAAATCATGGACAACAGAGATGGGAAACTCAGCCCAAAATGCGCCTCATTCAAAATGGGGCTCCAGGAAAAAACCACAGTACTATGTCAAGGATGGTAAGAATTATAGCTATAAAGTGGCAGGTGCAGTGGCGGTGGCAAATTCTGATGAAGCTTCACTAGTCAACCAAGCTCAGACAGAACTAATACATGGTCTTGGACGTGGTGGAAACTTTCCTCTTGGCGCAGTAAAGAAGCTGACAGAAGCCTATAAGGAGGATGATGATCAGTCTCGTGTTTCTGAAACAGAGGGAAGAGGGATGTTGGGCAAACCTGGAAGCAGAGAAAGGAAGGGAGGGGGAAAACGAAATGAGGTTCCGCCACAGCAGCAACAGCAACAGCAGGATAAACAATCTGATGTCCCGGAGGCTGAAGGGCAAGGACAAAGAGGGAGAGGTAGAGGCAGAGGGAGGGGAGGAGGAGGAGGAGGAAGAAGCAATCATTACAGGAAGGATCGAGCCATGAAGAAGCATTTCTCTGGAGTAGGTGGTTTTTAG 2571 0.4321 MSNRYDHGTQDINTNNNKPSVRNHNKFFPKTPNSNPNSDPNPNPTLSSSLRGRGATQHIPNPTDPAAGNFVRYLPQDEAVAAGLGADDGGLDPVESQRVVDLLNRELSRLLKLKPREFWKQVASDTSXHEFLDSFLQFKSRWYDFPHRGAKGIVAGVIVGELDLCRRVFMVLYRISSNKDPGARAADALTLRDHQVLLQEKKLLELPKLFDICAIYGHENEEITRLLVRNALNAQPWIHNDLTTVISHFLGIVSTMHERCSSSLEVLFSSGNPDHHNATFLQADLLEVMDFLNDAIVSMDAFVCSYKPAVIFFSCPIETSYGNEELLSFLARLHDSLIPSLQKGFHIIFADRQDETVANIVVSLKMLRMRLLKFGWQLLSSCYLSEEVFGDSNPLPAATKMFPANVEDPLIRADILVQTFREINSVSLQLQESHQKQTFLQDLERSFNILSRMERLKDNGWILIDDEQLQYLSGIFGSPKDILKEPDSTRTPVPNQTLQMDEDAAIVESKISQIRDLFPDYGKGFLTACLEVYDQNPEEVIQRILEGTLHEDLKHLDPTLETLPTGKPTTVGGKDKGKGKLVDSSSTEVVSVKQQTGGQLMSSSAPVGKFVRKSKDDEPGIGILDKKDDENTSKTAAMVLQYEYDDEYDDSFDDLGLSVADSGVEENETLADQVSAKSGKSWTTEMGNSAQNAPHSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVNQAQTELIHGLGRGGNFPLGAVKKLTEAYKEDDDQSRVSETEGRGMLGKPGSRERKGGGKRNEVPPQQQQQQQDKQSDVPEAEGQGQRGRGRGRGRGGGGGGRSNHYRKDRAMKKHFSGVGGF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2866 856 MobiDBLite consensus disorder prediction 1 72 - -
Amo17g2866 856 SMART cue_7 506 548 IPR003892 GO:0043130
Amo17g2866 856 MobiDBLite consensus disorder prediction 681 698 - -
Amo17g2866 856 CDD CUE_ASCC2 508 547 IPR041800 -
Amo17g2866 856 Gene3D - 506 549 - -
Amo17g2866 856 ProSiteProfiles CUE domain profile. 506 549 IPR003892 GO:0043130
Amo17g2866 856 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 854 - -
Amo17g2866 856 MobiDBLite consensus disorder prediction 780 794 - -
Amo17g2866 856 MobiDBLite consensus disorder prediction 1 56 - -
Amo17g2866 856 MobiDBLite consensus disorder prediction 796 813 - -
Amo17g2866 856 Pfam CUE domain 508 548 IPR003892 GO:0043130
Amo17g2866 856 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 854 - -
Amo17g2866 856 SUPERFAMILY UBA-like 506 563 IPR009060 GO:0005515
Amo17g2866 856 MobiDBLite consensus disorder prediction 761 856 - -
Amo17g2866 856 MobiDBLite consensus disorder prediction 681 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2866 Amo-Chr17 130740323 130745429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2866 K18667 - gmx:100778129 1182.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2866 17 130740323 130745429 Amo17g2866 17 130740323 130745429 ECH
Amo08g0791 08 14024967 14030041 Amo17g2866 17 130740323 130745429 hybridization