Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0791 ATGTCAAATCGCTACGATCATGGCACGCAAGACATTAATACCAACAATAACAAACCTTCCGTCAGGAATCACAAGAAATTCGCCCCCAAAACTCCCAATTCCAATCCAAACTCAGACCCAAACCCAAACCCTACCCTCTCATCCTCACTCAGAGGCAGAGGAGCCACACAACATATCCCAAACCCTACTGACCCTGCCGCTGGCAATTTCGTCCGCTACCTCCCTCAAGACGAGGCCGTCGCAGCTGGCCTTGGCGCCGACGATGGTGGATTGGACCCCGTAGAGTCCCAGAGAGTCGTTGATCTTCTCAATCGAGAGTTGTCTCGCTTACTCAAGTTGAAACCCAGGGAGTTCTGGAAGCAAGTGGCTAGTGATACTTCTTTGCATGAGTTTCTTGATAGCTTTCTGCAATTTAAGAGCAGATGGTATGATTTCCCTCATCGCGGGGCCAAAGGTATCGTCGCCGGAGTTATTGTTGGAGAGCTTGATTTGTGTCGACGGGTTTTCATGGTATTGTATCGAATTTCTTCTAATAAGGATCCTGGTGCTCGAGCTGCTGATGCCCTCACTTTGAGAGATCATCAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCAAAGTTGTTTGATATATGTGCCATATATGGTCATGAAAATGAAGAAATAACAAGATTGCTGGTCAGAAATGCTTTGAATGCTCAGCCTTGGATCCATAATGATCTGACCACAGTAATATCCCATTTTCTAGGGATTGTTAGCACAATGCATGAGCGTTGCAGCTCCTCATTGGAGGTGTTATTTTCTTCTGGAAATCCTGATCACCATAATGCTACTTTTCTTCAAGCTGATCTTTTGGAGGTGATGGATTTTTTGAATGATGCTATTGTATCGATGGATGCTTTTGTTTGTTCATACAAACCAGCAGTTATATTCTTCTCTTGCCCTATTGAAACAAGCTATGGAAATGAGGAACTGCTGAGCTTCCTTGCCAGATTGCATGATTCACTGATTCCATCCTTGCAAAAGGGATTCCATATCATTTTTGCTGATAGACAAGATGAAACAGTAGCTAATATAGTAGTAAGTTTGAAGATGTTAAGAATGAGATTATTGAAGTTTGGGTGGCAATTGTTGAGCTCTTGTTATCTAAGTGAAGAAGTGTTTGGAGATAGCAATCCTCTCCCAGCTGCCACAAAGATGTTTCCTGCCAATGTGGAGGACCCACTCATTAGAGCAGATATTCTGGTTCAAACATTTAGAGAAATCAATTCGGTATCATTACAGCTTCAGGAAAGCCATCAGAAGCAAACATTTCTTCAAGATCTTGAGAGGAGTTTCAATATATTAAGCAGAATGGAGAGATTAAAGGATAATGGATGGATACTCATCGATGACGAACAGCTTCAATATTTATCTGGGATTTTTGGTTCTCCAAAAGATATACTTAAGGAGCCAGATTCTACAAGAACCCCAGTGCCAAATCAAACATTGCAGATGGATGAAGATGCTGCAATTGTGGAGTCAAAAATAAGTCAAATTAGGGACCTCTTTCCTGATTATGGTAAAGGGTTTTTGACTGCATGTCTTGAGGTGTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTTCATGAAGATCTGAAACACTTGGACCCGACACTAGAGACGTTGCCAACAGGCAAGCCCACCACTGTGGGTGGGAAAGATAAAGGAAAAGGTAAACTAGTTGATTCTTCATCTACAGAAGTTGTCAGTGTCAAGCAACAGACAGGGGGGCAATTGATGTCATCCTCAGCTCCTGTAGGAAAATTTGTGAGGAAATCGAAGGATGATGAACCTGGTATTGGTATTCTGGATAAAAAGGATGACAAAAATACATCAAAAACTGCTGCTATGGTTTTACAATATGAATATGACGATGAATATGATGACTCTTTTGATGACTTGGGTCTAAGTGTAGCAGACTCTGGAGTAGAGGAAAACGAGACACTGGCTGATCAAGTCAGTGCAAAATCGGGTAAATCATGGACGACAGAGATGGGAAACTCAGCCCAAAATGCGCCTCATTCAAAATGGGGCTCCAGGAAAAAACCACAGTACTATGTCAAGGATGGTAAGAATTATAGCTATAAAGTGGCAGGTGCAGTGGCGGTGGCAAATTCTGATGAAGCTTCACTAGTCAACCAAGCTCAGACAGAACTAATACATGGTCTTGGACGTGGTGGCAACTTTCCTCTTGGCGCAGTAAAGAAGCTGACAGAAGCCTATAAGGAGGATGATGATCAGTCTCGTGTTTCTGAAACAGAGGGAAGACGAATGTTGGGCAAACCTGGAAGCAGAGTAAGGAAGGGAGGGGGAAAACAAAATGAGGTTCCGCCACAGCAGCAACAGCAACAGCAGGATAAACAATCTGATGTCCCGGAGGCCGAAGGGCAAGGACAAAGAGGGAGAGGCAGAGGGAGGGGAGGAGGAGGAGGAAGAAGCAATCATTACAGGAAGGATCGAGCCATGAAGAAGCATTTCTCTGGAGTAGGTGGTTTTTAG 2562 0.4336 MSNRYDHGTQDINTNNNKPSVRNHKKFAPKTPNSNPNSDPNPNPTLSSSLRGRGATQHIPNPTDPAAGNFVRYLPQDEAVAAGLGADDGGLDPVESQRVVDLLNRELSRLLKLKPREFWKQVASDTSLHEFLDSFLQFKSRWYDFPHRGAKGIVAGVIVGELDLCRRVFMVLYRISSNKDPGARAADALTLRDHQVLLQEKKLLELPKLFDICAIYGHENEEITRLLVRNALNAQPWIHNDLTTVISHFLGIVSTMHERCSSSLEVLFSSGNPDHHNATFLQADLLEVMDFLNDAIVSMDAFVCSYKPAVIFFSCPIETSYGNEELLSFLARLHDSLIPSLQKGFHIIFADRQDETVANIVVSLKMLRMRLLKFGWQLLSSCYLSEEVFGDSNPLPAATKMFPANVEDPLIRADILVQTFREINSVSLQLQESHQKQTFLQDLERSFNILSRMERLKDNGWILIDDEQLQYLSGIFGSPKDILKEPDSTRTPVPNQTLQMDEDAAIVESKISQIRDLFPDYGKGFLTACLEVYDQNPEEVIQRILEGTLHEDLKHLDPTLETLPTGKPTTVGGKDKGKGKLVDSSSTEVVSVKQQTGGQLMSSSAPVGKFVRKSKDDEPGIGILDKKDDKNTSKTAAMVLQYEYDDEYDDSFDDLGLSVADSGVEENETLADQVSAKSGKSWTTEMGNSAQNAPHSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVNQAQTELIHGLGRGGNFPLGAVKKLTEAYKEDDDQSRVSETEGRRMLGKPGSRVRKGGGKQNEVPPQQQQQQQDKQSDVPEAEGQGQRGRGRGRGGGGGRSNHYRKDRAMKKHFSGVGGF* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0791 853 SMART cue_7 506 548 IPR003892 GO:0043130
Amo08g0791 853 MobiDBLite consensus disorder prediction 795 813 - -
Amo08g0791 853 MobiDBLite consensus disorder prediction 668 702 - -
Amo08g0791 853 CDD CUE_ASCC2 508 547 IPR041800 -
Amo08g0791 853 MobiDBLite consensus disorder prediction 1 69 - -
Amo08g0791 853 Gene3D - 506 549 - -
Amo08g0791 853 ProSiteProfiles CUE domain profile. 506 549 IPR003892 GO:0043130
Amo08g0791 853 MobiDBLite consensus disorder prediction 760 853 - -
Amo08g0791 853 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 851 - -
Amo08g0791 853 MobiDBLite consensus disorder prediction 1 56 - -
Amo08g0791 853 MobiDBLite consensus disorder prediction 668 698 - -
Amo08g0791 853 MobiDBLite consensus disorder prediction 760 782 - -
Amo08g0791 853 Pfam CUE domain 508 548 IPR003892 GO:0043130
Amo08g0791 853 SUPERFAMILY UBA-like 506 563 IPR009060 GO:0005515
Amo08g0791 853 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0791 Amo-Chr8 14024967 14030041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0791 K18667 - gmx:100778129 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0791 08 14024967 14030041 Amo17g2866 17 130740323 130745429 hybridization