Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2855 ATGAAGAAAAAAAGAGTGGTACTTGTAACCAAAACTCCTTACAACACCAGCGAGGACATGATGAGTGAGGAGTCTCACCAAGACCAAGAAGTTTGCCTCAAGCCTTGGTGTTTCTTTTGCAGCATGAGAGAACCAGATGCATCTCTTAGAAGAGTTGGAATCTCCAACTACTTCAAAGAGATGCCTCTATGTGAGGATAAAGAAGATTATGATCAATATGTGTTGGTGCTGAGTGAACTATGGCACATTGCCATGACTCAATCCAACGACCCTGAGTTCCCTTCCCTTGGCATATTCAAGTGCATGGCTAATCTAATCAACAAAGCTATAAACAACAAAACCTGGCTTCTCACAAATCAAAACATATACATACCCTACTATGCTGCTCATATCATTGGATCTTACACCATGAACAAGGAAGAGTTTGCACAAATAGCTGTGCAATCAGGTGTTATACCTCCATTGTTAGAGCTTCTGAGGGGGAAAATCAGTTGGGTTGAACAAAGGGTTGCGGTTCGAGCATTAGGGCACTTGGCCAGTTATGAAAGCACATTCGATTCGGTATCGGAGTATGAACAAGAAGTGGTGAAAGTGACATTGAATCTAGCATGTACTTGCTTGGAAGTGGTGTATTCTGAGTTTGTAGGAGTGAAGAAGAAGAAGAGGGTAGAGTACCACAGGAACTTGCTTACAAGAGGTGTTGGTGATTTGGAGATGGAGAACCGAAAAGCTGAGGAATGGGGTAGCCAACTTCAGTGTTGGTGTATTCATCTTCTCAACTGTTTTGCTTTCAAAGAAAGATGTCTGAATCTGATTTGTCAGAAGGAGTTCTTGAAGCAACTTTGCCACATGTGGGGTGGGTTGGTGAATCACACGTCACCAGGTGGTGTTGGACTCCTTCGAATCCTGTGTTACAGTAAATTTGGAAGGAAAATCATTGCTGAGATCCCAAAAGTAATCATCAATCTCGGTAACATTTCAAGATCTTCGGATGATTGGCAGTATATGGCGATTGATTGTCTTTTACTTCTTCTCAAGGACTCAGATACAAGCCTTGGAGATAAATCAAACGTGGGTGAAACCATCACAAAAGTGCTGCTACTTGAGGAACATAAATTCAACAACAACAGGGACTTGCAACAAGTGCTGAATTTGAAGGTGTATAGGAGGAAGAAAGAGAAGGCATTGTGGGAAGAGAAATTAGAGGAAAGAAGGGTTTTGGTTGGTTTGATAAAGCAAGAAGCGAATGACAAGTTGAGGTTGGGAAAAGTAGAAGAAGCTTTGGTGAAGTACAATGAAGCACTTGAAGTTTGTCCATTGAAGTTGAGAAAGGAGAGAATGGTGCTTTATAGTAACAAAGCACAGTGCAATCTTGTGCTTAAGAATCCAGAAAGTGCAATCAGTGATTCAACGAGAGCGCTTTGCCTTTCGAACCCAGCGAACACGCACAGGAAAAGCCTCTGGAGAAGGTCACAGGCTTATGACATGAAAGGCATGGCGAGGGAGAGCCTTTTGGACTGCATAGTCTTCATGAAGAAGCAGCATCAGCAGAGGAGTCTCAAGATTCCTTACCATGCAGCGCGCATGATCTGCAAACACATGGATGCCACGTGGCTCTTTGCTGCTGCACGCTCGTCAAGGCTAATAAGAGTGATGAAAAAGAAAAAAAATCATCACTCTAATCATGAAAATGAAGCCAACAACTGTGAAGTGAACTTCCATGATCGATTGTCCACCATTAATGGAGAACCTTTTGCGGCGAAAGAAGTGAGTAGGAGAAAGGTGCAGAGGACACGGAGGAGAATTAAAAAAGCTAATATTGCAGCAGCTCAGCCAATAATGTAG 1845 0.4266 MKKKRVVLVTKTPYNTSEDMMSEESHQDQEVCLKPWCFFCSMREPDASLRRVGISNYFKEMPLCEDKEDYDQYVLVLSELWHIAMTQSNDPEFPSLGIFKCMANLINKAINNKTWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQIAVQSGVIPPLLELLRGKISWVEQRVAVRALGHLASYESTFDSVSEYEQEVVKVTLNLACTCLEVVYSEFVGVKKKKRVEYHRNLLTRGVGDLEMENRKAEEWGSQLQCWCIHLLNCFAFKERCLNLICQKEFLKQLCHMWGGLVNHTSPGGVGLLRILCYSKFGRKIIAEIPKVIINLGNISRSSDDWQYMAIDCLLLLLKDSDTSLGDKSNVGETITKVLLLEEHKFNNNRDLQQVLNLKVYRRKKEKALWEEKLEERRVLVGLIKQEANDKLRLGKVEEALVKYNEALEVCPLKLRKERMVLYSNKAQCNLVLKNPESAISDSTRALCLSNPANTHRKSLWRRSQAYDMKGMARESLLDCIVFMKKQHQQRSLKIPYHAARMICKHMDATWLFAAARSSRLIRVMKKKKNHHSNHENEANNCEVNFHDRLSTINGEPFAAKEVSRRKVQRTRRRIKKANIAAAQPIM* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2855 614 Gene3D - 76 367 IPR011989 -
Amo17g2855 614 SMART arm_5 139 180 IPR000225 GO:0005515
Amo17g2855 614 Coils Coil 552 572 - -
Amo17g2855 614 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 18 599 - -
Amo17g2855 614 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 18 599 - -
Amo17g2855 614 SUPERFAMILY ARM repeat 116 351 IPR016024 -
Amo17g2855 614 Gene3D Tetratricopeptide repeat domain 370 532 IPR011990 GO:0005515
Amo17g2855 614 SUPERFAMILY TPR-like 402 512 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2855 Amo-Chr17 130632517 130635025 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2855 - - aip:107607964 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2855 17 130632517 130635025 Amo17g2855 17 130632517 130635025 ECH
Amo08g0405 08 7854618 7856581 Amo17g2855 17 130632517 130635025 hybridization