Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0405 ATGGCTTCTCTAAACTTAAAAGTTACTCCATATTTATCTCTAAAGTTGCACTTCGAGACTCAAACTAGTCTTTCCGGCACATTCCGTCCATATGACGCTACCGAAAAGTTGAGTTGGCCTCCTTCGAAGGGAATCCAAGCAAATATAGAGCAAGATGATGATGGTCAGGTGCTCCCTATCAGTGGCTTGTGGAACACGACAATGGCACATCCAAGTGACCCAGAATTCATAGAGCTAGGAATTTTTGAATGCATGGCTGCTCTAATATGGAAGGGACTGAAGAATTGGTGCTGGCTTTCTCACGACCAAAATATTTACATTCCTTATTATGCAGCTCATATACTTGGTTCCTACATAATGAATATGGAAGAATTTGCTGAAATTAGCAATGAGTTCCTGAAAATAGTTTATTCGCACTTTTATCAATATGTTGATGGAAGGCTAAGTTATCACTGTGATTTGCTTACACGTGACATGAGTGGTGTTGAAATGGAGTCCAAGAAGGCTGAGAAATGGGCTAATCCCAATACATGTCACAAGATGATTGATAAAGTGGTTCCTACATTAGTTGACCTTGTCGAAATTACAACTCTTGGTGATCACAAAAAATTTGATGATTCTATTCTTGGTGTTCTTCAGGACTACATCCAGTCGTAG 657 0.3957 MASLNLKVTPYLSLKLHFETQTSLSGTFRPYDATEKLSWPPSKGIQANIEQDDDGQVLPISGLWNTTMAHPSDPEFIELGIFECMAALIWKGLKNWCWLSHDQNIYIPYYAAHILGSYIMNMEEFAEISNEFLKIVYSHFYQYVDGRLSYHCDLLTRDMSGVEMESKKAEKWANPNTCHKMIDKVVPTLVDLVEITTLGDHKKFDDSILGVLQDYIQS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 50 128 - -
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 129 173 - -
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 174 217 - -
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 174 217 - -
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 50 128 - -
Amo08g0405 218 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 129 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0405 Amo-Chr8 7854618 7856581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0405 - - twl:120013364 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0405 08 7854618 7856581 Amo17g2855 17 130632517 130635025 hybridization